Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1288 ATGAACATGTTGCTCCATAAAAAACCTTTTGTTCTCTCCTTTTCAGCATTGGTTATAGTATTTTCATGTCAGTGTTCTGCTACTCAGTTCAAGGTGGGAGATTCATCCGGTTGGGTTATTCCACCATATCCATTGTACTACACTAAATGGTCATATTCTCACTTCATGAGAGTGGGTGACTCTCTAGAATTCCACTTCGACCCCAAATTCTACAACTTAGTTCAGGTACAAAAATCTGACTATGAGCATTGCACAACACTTAAGCCTCAACTAGTATTCAGCACTAGCCCAGCAATTATTCCACTGAAGGAGAAAGGCACTTTGTTCTTCATATGCACCATCTCAAACTATTGTTGTCTAGGCCAAAAGATTGCCATTACTGTCCATGAAAACATTCCTCCATGGCTACCACCATTGTCGCCGTCTTCGGCACCATCACCATCCCGAGTACCATTACCACCAAGTTCTGCTCCAGCATCTAGCATAAGCCCTGTGCCAGCTAATTCTACTGCTCCAGGAGGTAATAATAATGGTGGGAATTCTCCTACACAAGGGGAGAAGTCTAATGCAGTGGCATTGGTTTATAGGAATAGTACTTTCAATGTTTCTTTTTGGAGAATCTTATCTATGTTTGGTAGTTTCTTTGGACTTTGGATGATTTAG 663 0.4133 MNMLLHKKPFVLSFSALVIVFSCQCSATQFKVGDSSGWVIPPYPLYYTKWSYSHFMRVGDSLEFHFDPKFYNLVQVQKSDYEHCTTLKPQLVFSTSPAIIPLKEKGTLFFICTISNYCCLGQKIAITVHENIPPWLPPLSPSSAPSPSRVPLPPSSAPASSISPVPANSTAPGGNNNGGNSPTQGEKSNAVALVYRNSTFNVSFWRILSMFGSFFGLWMI* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1288 220 PANTHER OS03G0648500 PROTEIN 7 135 - -
Lan11g1288 220 ProSiteProfiles Phytocyanin domain profile. 28 130 IPR003245 GO:0009055
Lan11g1288 220 MobiDBLite consensus disorder prediction 161 185 - -
Lan11g1288 220 Gene3D - 27 133 IPR008972 -
Lan11g1288 220 MobiDBLite consensus disorder prediction 146 160 - -
Lan11g1288 220 Pfam Plastocyanin-like domain 46 122 IPR003245 GO:0009055
Lan11g1288 220 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Lan11g1288 220 MobiDBLite consensus disorder prediction 146 185 - -
Lan11g1288 220 PANTHER BLUE COPPER PROTEIN 7 135 IPR039391 GO:0009055
Lan11g1288 220 SUPERFAMILY Cupredoxins 27 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1288 Lan-Chr11 19008407 19009929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1288 4 150 Miscellaneous Gene Families AT2G31050 35.135 1.71e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1288 - - gmx:102662708 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1288 11 19008407 19009929 Lan20g0898 20 8533033 8534716 LSH