Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1263 ATGGCGGAAGCGACTAGTCCACCACACGATGATCACGAAAGCGGAGGTGATCAGAGTCCTCACGGTTGTTCCTCCGCCGCAAGGGAGCAAGACCGGTTCCTGCCAATTGCCAACATCAGCCGCATTATCAAGAAAGGCCTTCCTGCCAATGGAAAGATTGCTAAAGATGCTAAGGACACTATGCAAGAATGTGTTTCTGAATTCATTAGTTTCATTACTAGCGAGGCGAGTGAGAAATGCCAGAGAGAGAAGAGAAAGACTATAAATGGAGATGATTTGCTATGGGCTATGGCCACTTTAGGATTTGAAGACTACATTGAGCCACTTAAGGTGTACCTGCATAGGTACAGGGAGATTGAGGGTGATACTAAAGGATCTGTGAGAAGTGGTGATGGATCTGCTAGACGAGATCAAGCTGGCCTTGCAGGTCAAAATTCTCAGCTTGTTCATCAGGGTTCACTGAGCTATATGAATAACCAGATTTAG 486 0.4609 MAEATSPPHDDHESGGDQSPHGCSSAAREQDRFLPIANISRIIKKGLPANGKIAKDAKDTMQECVSEFISFITSEASEKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLHRYREIEGDTKGSVRSGDGSARRDQAGLAGQNSQLVHQGSLSYMNNQI* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1263 161 PRINTS CCAAT-binding transcription factor subunit A signature 61 79 - -
Lan11g1263 161 PRINTS CCAAT-binding transcription factor subunit A signature 80 98 - -
Lan11g1263 161 PRINTS CCAAT-binding transcription factor subunit A signature 99 117 - -
Lan11g1263 161 PANTHER BNAA04G21250D PROTEIN 1 154 - -
Lan11g1263 161 SUPERFAMILY Histone-fold 30 155 IPR009072 GO:0046982
Lan11g1263 161 ProSitePatterns NF-YB/HAP3 subunit signature. 64 80 IPR003956 GO:0005634|GO:0006355|GO:0043565
Lan11g1263 161 Gene3D Histone, subunit A 20 156 IPR009072 GO:0046982
Lan11g1263 161 MobiDBLite consensus disorder prediction 1 17 - -
Lan11g1263 161 MobiDBLite consensus disorder prediction 1 28 - -
Lan11g1263 161 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 154 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lan11g1263 161 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 33 97 IPR003958 -
Lan11g1263 161 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1263 Lan-Chr11 18579860 18582635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1263 12 160 CCAAT-HAP3 Transcription Factor Family AT2G37060 76.667 6.95e-79 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lan11g1263 CBFD_NFYB_HMF 1.8e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1263 K08065 - gmx:100779577 268.47