Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1251 ATGTTGCATGATGTTTATGATCAGCCATTGTCACCAAAGGATGAACAACAACTTCCCATTGACGAAACTTCAATCCCGATCAGCGATCGAATTTTGGAGCTTTGCGACTTCCAAGAGCCTCTGCAGAATTCTGAGGTTACCTCAAGCTCAAATTGTTGCTATGATGAAAACTCCTCATATGTAACAAATATATCTCTAGCATTAGATGTAGACACTAACTTGAATAGCAATAGCAATAACACATTAACCACCTCAACTAGTACCACCAACAATAACAACACAACCAATAGTAGCAACCTTTCAATCATCTTTGATTCACAAGAGGAAATTGACAATGATATATCTGCCTCAATAGACTTTTCATCATCTCAAACTTTCAATGTTCCACAATTTCTCCAAAACCAGCAAGAACAGTTTGGTAATTTTTCTTCTATGCAGCAGACTAATATGCAGCAACTAGCAGCATGTAATTCAGGTTTGGATAGCTTCTCTCAGTATCCGAACGACCCTGTTGCGACCCTTATGGGAACTTCATTATCTTGTGTGTTTGAAGAGGATTGCATATCTTCTGTCCCTTCTTATATGCCTCTCAACCCTTCATCTCCTTCTTGCAATTTTATTAGTCCTGGCATAGGGTCATACATGCCTCCAGGGCCTCTTACTACTGCCTTATCCGCTGACCGTTCCGGATTGTTTGGTGGAGGCATGCTTCTTGGTTCTGAACTTCAAGGACAAGAACTTGAATACCAAGCAGAAAATGGTGGAGTGTTTTCTACAGATTCAATGTCGCGAGTGTTTAATCCCTCAGACATTCAGGCACTTGGTGTTGTTGAGGGTCAGCAACTAGTAGCTGGTGCTGGGAATTCTGCTACTTTGACACCAGAAATCTCAACCTTGGAGGACTCTACCTTCAAAGTTGGAAAACTCTCTGTTGAGCAAAGGAAAGAAAAGATTCATAGATACATGAAGAAAAGAAATGAGAGAAACTTCAGCAAGAAAATTAAGTATGCATGCCGCAAAACTCTAGCTGATAGCAGACCTCGGGTAAGAGGAAGATTTGCAAAGAATGATGAATTTGGAGATACACAAAATAATCATAGATCTGCTAGTAACAATCATGAAGAAGATGATGAAGAGGAAGTTGGTATAAAAGAAGATGATATGGTTGATTCATCAGATATCTTTGCTCATATAAGTGGAGTGAACTCTTTCAAATGTAACTATTCTATCCAATCATGGATTTGA 1245 0.3936 MLHDVYDQPLSPKDEQQLPIDETSIPISDRILELCDFQEPLQNSEVTSSSNCCYDENSSYVTNISLALDVDTNLNSNSNNTLTTSTSTTNNNNTTNSSNLSIIFDSQEEIDNDISASIDFSSSQTFNVPQFLQNQQEQFGNFSSMQQTNMQQLAACNSGLDSFSQYPNDPVATLMGTSLSCVFEEDCISSVPSYMPLNPSSPSCNFISPGIGSYMPPGPLTTALSADRSGLFGGGMLLGSELQGQELEYQAENGGVFSTDSMSRVFNPSDIQALGVVEGQQLVAGAGNSATLTPEISTLEDSTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEFGDTQNNHRSASNNHEEDDEEEVGIKEDDMVDSSDIFAHISGVNSFKCNYSIQSWI* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1251 414 Pfam CCT motif 314 356 IPR010402 GO:0005515
Lan11g1251 414 ProSiteProfiles CCT domain profile. 314 356 IPR010402 GO:0005515
Lan11g1251 414 MobiDBLite consensus disorder prediction 1 21 - -
Lan11g1251 414 MobiDBLite consensus disorder prediction 351 381 - -
Lan11g1251 414 PANTHER CCT MOTIF FAMILY PROTEIN 20 414 - -
Lan11g1251 414 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 20 414 - -
Lan11g1251 414 MobiDBLite consensus disorder prediction 351 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1251 Lan-Chr11 18370740 18375322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1251 294 355 C2C2-CO-like Transcription Factor Family AT5G24930 41.935 1.76e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan11g1251 CCT 5.5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1251 - - gmx:100803778 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1251 11 18370740 18375322 Lan4g1224 4 20116844 20121497 LSH