Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1241 ATGAAGTCAGTGATTGGAGGAAGTTCATCAGAGACATCTAGTGAAGAAACTGATCATCAGAAAGAAGACCAATATGATTCTACAAGTTCCAAACGTTCATATGATTGCACATTCTGCAGGAGGGGCTTCACCAATGCTCAAGCTTTAGGAGGTCACATGAATATTCATAGAAAAGACAAAGCCAAAGCCAAACAAGGAACACCAAACAATTTATTTACCAAAGAAGAATACATTATGGTCCCTTCTTTTATTCCTCAAACCTCAACTTTTTGCTCCATGTTTGAGTCTCAAAGAAACTATGACATCCATTTTCAACCATCTTCAACACCTAATTATTCTAGAAACCCACCTGCTTATGCCTTTCAATATGAGTTTCTAAATCCCACAAGGTATGAATCTTTGAGTACAAATTATCAAGAGCTTTTGGGTCCCAATTTGACTCTCCAAATTGGTCCAAGTCATGTGAGTACTGATGAAGTTAGAAAAGGGATTCAGAATGATGGTGAAGTTGTGGACTTGGAGCTTAGGCTTAGCCATTATCCATACTCAAACTAG 555 0.3784 MKSVIGGSSSETSSEETDHQKEDQYDSTSSKRSYDCTFCRRGFTNAQALGGHMNIHRKDKAKAKQGTPNNLFTKEEYIMVPSFIPQTSTFCSMFESQRNYDIHFQPSSTPNYSRNPPAYAFQYEFLNPTRYESLSTNYQELLGPNLTLQIGPSHVSTDEVRKGIQNDGEVVDLELRLSHYPYSN* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1241 184 MobiDBLite consensus disorder prediction 14 29 - -
Lan11g1241 184 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 11 181 - -
Lan11g1241 184 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Lan11g1241 184 MobiDBLite consensus disorder prediction 1 32 - -
Lan11g1241 184 PANTHER OS07G0101800 PROTEIN 11 181 - -
Lan11g1241 184 SUPERFAMILY beta-beta-alpha zinc fingers 31 61 IPR036236 -
Lan11g1241 184 Gene3D Classic Zinc Finger 8 82 - -
Lan11g1241 184 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1241 Lan-Chr11 18238208 18238877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1241 8 100 C2H2 Transcription Factor Family AT2G37740 43.137 1.83e-16 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan11g1241 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1241 - - lang:109360170 374.015