Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1240 ATGAGGAGTATCAATTCTGAAGTTAGGAGCTCAGTTGCTTCAGGACTTCGGGGTAGGAAAGATACTAGTGATAGAGTTGAGCGAAGATTGAGCTTCAGCATTTGCCAGAGGATAATCCAGCACACTGATTTCAATTCTATGTCGAGAGATTTGCAAGTTCTGTTGGCCGACAATGATGATGTAAATAGAGTAGTTACCCAAAAGTTGCTTCAGAAATTAGGTTGTGCCATTCGATTGGAAGCTCATTATAGTAAGAATTCCAACAAAGGATTCGAATGCCTCACTGTCATTGGACCTACTGGATATTCATTTCAAGTCATTATTTTGGTCCTTAACATGCCTGATTTAGATAGCTTTGAAGTCACCACAAGGATTCGGAAGTTCAGAAGCCGAATTTGGCCTATGATTGTTGTGTTGACATCAAGCACAGAAGATTTGTGGGATAGATGCATGCAGATTGGTATTAATGGAGTTATCCGGAAACCGGTTTTGTTACAAGGAATTGCTAGTGAACTCAGAAGAATCCTGATGCAGGAAAATGAAATTCTATGA 552 0.3986 MRSINSEVRSSVASGLRGRKDTSDRVERRLSFSICQRIIQHTDFNSMSRDLQVLLADNDDVNRVVTQKLLQKLGCAIRLEAHYSKNSNKGFECLTVIGPTGYSFQVIILVLNMPDLDSFEVTTRIRKFRSRIWPMIVVLTSSTEDLWDRCMQIGINGVIRKPVLLQGIASELRRILMQENEIL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1240 183 SUPERFAMILY CheY-like 50 176 IPR011006 -
Lan11g1240 183 Pfam Response regulator receiver domain 53 166 IPR001789 GO:0000160
Lan11g1240 183 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 44 180 - -
Lan11g1240 183 Gene3D - 36 181 - -
Lan11g1240 183 SMART REC_2 51 176 IPR001789 GO:0000160
Lan11g1240 183 ProSiteProfiles Response regulatory domain profile. 52 176 IPR001789 GO:0000160
Lan11g1240 183 PANTHER ETHYLENE RESPONSE SENSOR 2 44 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1240 Lan-Chr11 18232139 18233468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1240 39 181 Miscellaneous Gene Families AT3G04580 49.306 6.91e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan11g1240 Response_reg 2.1e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1240 K14509 - gmx:100787425 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1240 11 18232139 18233468 Lan20g0864 20 8120164 8124041 LSH