Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1223 ATGATGAATTCAGAGAAGCTAGTGAGCAATGAGATTTCAAGTGAAGAAAGTGATCACCAAGAAGAAGCACAAGATGACACTGAAGGGGCAAAACGCTCTTATGAGTGCACATTTTGCAAGAGAGGTTTCACAAATGCTCAAGCCTTAGGGGGTCACATGAATATCCACAGAAAAGATAGAGCCAAGGCTAAGAAAGTCACAAACCAAACCAATGAGGAATATTCCATGGCCCCTCCTTTTGCTTCAGGGTTTTCAAACCAAACCACAATGCATTACTCCATTTTGGAGTCTCAAAGTAACTGCAACATTAACTTTCATCCACCACCAGCACCAAATCTTTTTAGAGACCAACCTCCATATGCGCCAAATACCCAGCTCCAATATGATCAATGTCATAACCTAGGGTCTAGGCCTATGAATTTGAACCAATTAGAACTTAGGGGTGCAAATTTGAGCCTACAAATTGGTCCAAGTCACGTGGATAATAACACTAATCAAGTTAGGAGAGGAACTCAAGAAGATGATGAAGTGGATTTGGAACTTAGACTTGGCCATGATCAATACTAA 567 0.4092 MMNSEKLVSNEISSEESDHQEEAQDDTEGAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKKVTNQTNEEYSMAPPFASGFSNQTTMHYSILESQSNCNINFHPPPAPNLFRDQPPYAPNTQLQYDQCHNLGSRPMNLNQLELRGANLSLQIGPSHVDNNTNQVRRGTQEDDEVDLELRLGHDQY* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1223 188 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 2 186 - -
Lan11g1223 188 MobiDBLite consensus disorder prediction 1 30 - -
Lan11g1223 188 Gene3D Classic Zinc Finger 8 89 - -
Lan11g1223 188 PANTHER OS07G0101800 PROTEIN 2 186 - -
Lan11g1223 188 Pfam C2H2-type zinc finger 34 58 - -
Lan11g1223 188 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Lan11g1223 188 SUPERFAMILY beta-beta-alpha zinc fingers 31 60 IPR036236 -
Lan11g1223 188 SMART c2h2final6 34 56 IPR013087 -
Lan11g1223 188 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1223 Lan-Chr11 17947852 17948464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1223 25 82 C2H2 Transcription Factor Family AT3G09290 55.172 1.01e-16 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan11g1223 zf-C2H2_6 2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1223 - - gmx:102669921 199.134