Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1211 ATGGTTTCAGCACTTACTGAAGTCATTGGTGGCACCAACAATAATGACCCACTTCAGATACTTCAAGACCCTTTAACTACTGGAACCCAGAATCAACAATCCCAACAACCACAAGAAGATAAAGGAAAGATGAGAAAAATACACTATAGATGTGTGAGACAACGACCATGGGGGAAGTGGGCAGCAGAGATTAGAGATCCAAAGAAAGCAGCAAGGGTATGGCTTGGAACATTTGAAACTGCTGAAGCTGCTGCACTTGCTTATGATGAAGCTGCTCTCAGATTCAAAGGAAGCAAAGCAAAACTCAATTTCCCTGAAAGGGTTCAACCACCAATAAATCAAGTTCCTCTTCCTCCTCCTCCACACTTTTCTCAACAATCATATTCATATAATCCCTTCCAATATGCAGCATTTATGGGCATTGGTGGTAGTAGTAATAACATTAATAAATTCAATTATGAAATGGATGGTTTCTATGGGAATCAGCCCTTTACATCTGAATCATCTTCTGAAATAACTCAGCAGTAA 528 0.3977 MVSALTEVIGGTNNNDPLQILQDPLTTGTQNQQSQQPQEDKGKMRKIHYRCVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAALAYDEAALRFKGSKAKLNFPERVQPPINQVPLPPPPHFSQQSYSYNPFQYAAFMGIGGSSNNINKFNYEMDGFYGNQPFTSESSSEITQQ* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1211 175 MobiDBLite consensus disorder prediction 9 38 - -
Lan11g1211 175 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Lan11g1211 175 CDD AP2 48 106 IPR001471 GO:0003700|GO:0006355
Lan11g1211 175 SUPERFAMILY DNA-binding domain 48 106 IPR016177 GO:0003677
Lan11g1211 175 MobiDBLite consensus disorder prediction 9 45 - -
Lan11g1211 175 Gene3D AP2/ERF domain 47 107 IPR036955 GO:0003700|GO:0006355
Lan11g1211 175 Pfam AP2 domain 48 97 IPR001471 GO:0003700|GO:0006355
Lan11g1211 175 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF115-LIKE 1 170 - -
Lan11g1211 175 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Lan11g1211 175 PANTHER DNA-BINDING DOMAIN 1 170 IPR044808 GO:0003700|GO:0009873
Lan11g1211 175 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Lan11g1211 175 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1211 Lan-Chr11 17779364 17781340 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1211 1 109 AP2-EREBP Transcription Factor Family AT5G61890 67.826 9.86e-47 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan11g1211 AP2 7.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1211 - - lang:109359782 333.954