Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1208 ATGGATCGAAGAGATGGGAAAATATCATTTCATTCGGAAGAAGCAGAAAAAGAAGAGGACAACTATGAGTTCCCAATCTATTCAGAAAGGTCACAACAAGATATATCAGCAATGGTTTCAGCACTTACTCAAGTCATTGGTGGCACCATCCATAATGACCCAGTTCAGATACTTCAAGACCCTTTAACTTCGGAAACCCAGAATCAACAACCACAAGAAGATCAAGGGAAGATGAGAAAAATACACTATAGAGGTGTGAGACAACGTCCATGGGGAAAGTGGGCCGCAGAGATTAGAGATCCAAAGAAAGCAGCAAGAGTATGGCTTGGAACATTTGAAACTGCTGAAGCTGCTGCACTTGCTTATGATGAAGCTGCTCTCAGATTCAAAGGAAGCAAAGCAAAACTCAATTTCCCAGAAAGGGTTCAACCACCAATAAATCAAGTTCCTCTTGCTCCTCCTCCAAACTTTTCTCAAGAACCATATTCAAATAATCCCTTCCAATATGCACCATTTATGGGCATTAGTGGGAGTAGTAACGACATTAATAACTTCAATTATGAAATGAATGGTTTCTATGGGAATCAGCCCTTTACATCTACATCATCTTCTGAAATAACTCAGCAGCAGCAACAAGAGCTCATGAGGTTTTCCATGCAGTATGGAGGTTCTTCTTCTTCTTCTTCTAATCAACCTCCTAAAAGTTGGATGGATGACAATGATGGAAGACATTAA 735 0.4014 MDRRDGKISFHSEEAEKEEDNYEFPIYSERSQQDISAMVSALTQVIGGTIHNDPVQILQDPLTSETQNQQPQEDQGKMRKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAALAYDEAALRFKGSKAKLNFPERVQPPINQVPLAPPPNFSQEPYSNNPFQYAPFMGISGSSNDINNFNYEMNGFYGNQPFTSTSSSEITQQQQQELMRFSMQYGGSSSSSSNQPPKSWMDDNDGRH* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1208 244 MobiDBLite consensus disorder prediction 1 24 - -
Lan11g1208 244 SUPERFAMILY DNA-binding domain 82 140 IPR016177 GO:0003677
Lan11g1208 244 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Lan11g1208 244 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Lan11g1208 244 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Lan11g1208 244 Pfam AP2 domain 82 131 IPR001471 GO:0003700|GO:0006355
Lan11g1208 244 CDD AP2 82 140 IPR001471 GO:0003700|GO:0006355
Lan11g1208 244 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Lan11g1208 244 MobiDBLite consensus disorder prediction 200 236 - -
Lan11g1208 244 Gene3D AP2/ERF domain 81 141 IPR036955 GO:0003700|GO:0006355
Lan11g1208 244 PANTHER DNA-BINDING DOMAIN 20 181 IPR044808 GO:0003700|GO:0009873
Lan11g1208 244 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 20 181 - -
Lan11g1208 244 MobiDBLite consensus disorder prediction 200 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1208 Lan-Chr11 17676502 17677910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1208 24 159 AP2-EREBP Transcription Factor Family AT5G61890 60.000 4.51e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan11g1208 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1208 - - lang:109337253 388.652