Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1189 ATGGCTTTGCAAACTTTTGATTTACCTTTGGCCTCAGAAAGAGCTAAGTTTTCAGAAGTTCAATTAAGAAGGCACAGTAGTGGAGAAGCATATTTTGGATACAACAAAGAAAATGTTATTTCTCGTTATCTTAGAGCTTCTTCTGGCTCTTGTCATGATTTATGTAAAATTGGAAACAAGACTGCATTTGAGGCCAATGACAAACATTCTACATCTAGGAGAGCATCACTTCATTCCAAGCCAATGAAGATGCCTACGGCCAATCGCAGAATGTCGATCGATTCGAGGCTTCCGATTTCTTGCACTGCTGACACACATAAGCTGGAGCTTCCAACAAAATCTTCAGACAGCAAAAAACAAAGAGGGAAAGAAGTTCTGGAAAACAGAAACAATGCATCACTTGTTAAGGCCAAACCATTATTCTTATCAAAATCAAATGTTTCTTCTATCACCAAGACTACTAGTCAATCAAAAACAACTTCCAAGAAGAAGGAAACTATATCGAAATCGACTTCTGGTAGAGCGAAAACTACTTCAAAATCAACTTTCGAAGTTAGAGCAACAGAGTTGTCTAAAAAGCCTGTGATTTTCTTGAATCCAAACACAGTTGCTTTGAAGACAATACCTTCCATGGATTCCTCAGAGAGCATTGGTGGCCAAAGGAGTACTAAGATTAAGATGGAAAAGAGGGAAGGCTCTCGCGAAGTAGTTTCGCCTTCACGAGCATCATTGTCGTCCAAACCATCTCCCAAAATCAATGCAGGAAACCACAACAGCCTGAAAATCGTGTCGCGGGTTAAGAATCAACCCGAGGCTAGAAGAGTTGAACCGAAGAAACTCAATGATGATGTTGAGGAAAAGACTTTGTATGTTATCAATGTGGAAAGTGATAACCAAACTTCGCAATCTGATCAAAATGGGAGCCAGGATATTGAACCATCACCCGAATTTTCATCCTCAGTTTCTCAATCCATATCCCAATCAGACCAAGAAAAAACTGAATATTCAACTGTCGAACTCGACGAGGATTCGTCTTCAGGAAACTGCGAAGCCGAATATATAGACAATAAGGATAGTCTGAAAGTTCAGGAGAATGGTAATCCTCAAAAGGGTGAAACTGTATTTCTTGAATACAAGGAATGCCAAATGTTAAAGCTAAAAATGGTTGGAGGAAAATTGGTTGAAACTCAATTTGAGAAAATTAGTCCAAAGAAGCTTAAATTCCGCCGCGGAAAAATGTTGCAGGAAAATGCTACTAATGTTAACATTGATGATATAACTGATTCAGAGAAGGTTAATTTGAGACATCTAGAAGTTGAGGGAAAGAAAGATGAAGAGATATTGTTGAATAATGTAATTGAAGAAACAGCAAGTAAATTGGTTAAATGTGAGAAGGGTAAGGTTCAAGCATTGGTTAATGCCTTTGAAGCTATAATCTCTCTGCAAGAAAAAAATGTATTTGACAAACATTGTTAG 1476 0.3801 MALQTFDLPLASERAKFSEVQLRRHSSGEAYFGYNKENVISRYLRASSGSCHDLCKIGNKTAFEANDKHSTSRRASLHSKPMKMPTANRRMSIDSRLPISCTADTHKLELPTKSSDSKKQRGKEVLENRNNASLVKAKPLFLSKSNVSSITKTTSQSKTTSKKKETISKSTSGRAKTTSKSTFEVRATELSKKPVIFLNPNTVALKTIPSMDSSESIGGQRSTKIKMEKREGSREVVSPSRASLSSKPSPKINAGNHNSLKIVSRVKNQPEARRVEPKKLNDDVEEKTLYVINVESDNQTSQSDQNGSQDIEPSPEFSSSVSQSISQSDQEKTEYSTVELDEDSSSGNCEAEYIDNKDSLKVQENGNPQKGETVFLEYKECQMLKLKMVGGKLVETQFEKISPKKLKFRRGKMLQENATNVNIDDITDSEKVNLRHLEVEGKKDEEILLNNVIEETASKLVKCEKGKVQALVNAFEAIISLQEKNVFDKHC* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1189 491 MobiDBLite consensus disorder prediction 67 90 - -
Lan11g1189 491 MobiDBLite consensus disorder prediction 222 236 - -
Lan11g1189 491 MobiDBLite consensus disorder prediction 209 281 - -
Lan11g1189 491 MobiDBLite consensus disorder prediction 109 126 - -
Lan11g1189 491 Pfam Plant calmodulin-binding domain 389 480 IPR012417 GO:0005516
Lan11g1189 491 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 72 382 - -
Lan11g1189 491 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 386 486 - -
Lan11g1189 491 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 75 - -
Lan11g1189 491 MobiDBLite consensus disorder prediction 267 281 - -
Lan11g1189 491 PANTHER EMB|CAB62594.1 72 382 - -
Lan11g1189 491 PANTHER EMB|CAB62594.1 1 75 - -
Lan11g1189 491 PANTHER EMB|CAB62594.1 386 486 - -
Lan11g1189 491 SMART CaM_binding_2 382 480 IPR012417 GO:0005516
Lan11g1189 491 MobiDBLite consensus disorder prediction 293 333 - -
Lan11g1189 491 MobiDBLite consensus disorder prediction 104 131 - -
Lan11g1189 491 MobiDBLite consensus disorder prediction 147 181 - -
Lan11g1189 491 MobiDBLite consensus disorder prediction 238 265 - -
Lan11g1189 491 MobiDBLite consensus disorder prediction 293 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1189 Lan-Chr11 17122774 17124324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1189 427 478 Calmodulin-binding Proteins AT5G04020 45.283 5.52e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1189 - - lang:109360152 893.649