Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1187 ATGCCCAGCTTTTCATCTCTCCCTGGGTCGATTGGTGGACGGTTCTTTGGTAGGAATCCTGATAGCACAGCCGGAAATGGCGGAGACAGCAGCAGCGACACTGTCGTCGTGCACGACGACAGCAGCCCAGCAATTGACACGGTGGAGTGTTACGCCTGCACGCAGTTAGGGGTGCCAGCGTTCCACTCCACCAGCTGTGACAGCTATCAACAGCCACAATGGGAGGCATCTGCTGGCTCCTCTTTAGTTCCAATCCAGAACCAGTCCAAGGGCTCGACTGTCCGTGTCAGATCTCGGATTAACTCGGGCCCTTTCGGACTGGTTCTAGATCCGAGAACAAAGCATGTGCAAGTATGGAACCGCGCGCTACTTCTAGCGCGTGGGGTAGCCCTTGCAATTGATCCACTCTTCTTCTACGCACTGTCCATCGGTAGGGAGGGGACGCCGTGCTTGTATATGGACGGGTGGTTGGCGGCGGTGGTGACGGTGGCGCGGTCAATTGTGGATGCGGTGCATCTGATTCACTTGTGGTTGCAGTTCAAGATGGCGTATGTGTCGAGAGAGTCGCTTGTTGTTGGGTGCGGGAAGCTCGTGTGGGATGCACGTGACATTGCAGCACATTATCTTCGATCTCTCAAGGGGTTCTGGTTCGATTTGTTTGTTATTCTTCCTGTTCCACAGACTGTATTCTGGTTGATAGTACCAAAACTGATAAGGGAAGAGCGACTTAAGATTATCATGACCATAATGCTCTTAATTTTTTTGTTCCAATTTCTCCCCAAGGTTTATCACTGCATCTGCATGATGAGAAGAATGCAAAAAGTCACAGGCTACGTCTTTGGCACTATTTGGTGGGGCTTTGGTCTCAATCTCATAGCTTATTTCATTGCTTCTCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCAATTCAACGCGTCGCGTCGTGCATTCGGCAGCAATGTGAGAGAACTCATGGATGCAATCTCTCTTTGTCTTGCGCAGAGGAGGTATGCTACCAATTTATGTCATCAGATGGAACAGTAGGAACTCCATGTGGTGGAAATTCAACAATTGCTGCAAGGAAGCCTTTGTGCTTAAATGGTGAAGGACCTTTCAAATTTGGAATCTACCAATGGGCACTTCCAGTCATATCCAGCAACTCCTTGGCTGTCAAGATTCTTTATCCCATATTTTGGGGTTTGATGACCCTCAGCACTTTTGGCAATGATCTTGAACCCACAAGTAATTGGCTAGAAGTGATTTTCAGCATATGCACCGTACTCAGTGGACTACTGCTTTTCACTTTGTTGATTGGTAACATCCAGGTATTCTTACATGCAGTGATGGCAAAGAAGAGAAAGATGCAGCTGAGATGCCGCGACATGGAATGGTGGATGAGTAGAAGACAGTTACCGTCGCGATTAAAGAAAAGAGTTCGACATTTTGAACGTCAAAGATGGGCAGCCATGGGAGGAGAAGATGAGATGGAATTGATCAAAGACTTGCCTGAAGGACTTAGAAGGGACATTAAACGCTATCTTTGTCTTGACCTCATTAAAAAGGTACCACTATTTCACAATTTGGATGATCTTATTCTTGACAACATCTGTGACCGAGTTAAGCCCCGAGTCTTAACTAAAGATGAAAAGATAATTAGAGAAGGTGACCCAGTACCAAGAATGGTATTCATTGTTAGTGGCCGCATAAAGCGAAACCAAAGTCTCAGCAAAGGTATCGTAGCCTCGAGTATCTTAGAACCCGGAGGATTCTTAGGTGATGAGTTACTTTCATGGTGTCTTCGCCGCCCTTTTATGGAAAGACTCCCAGCTTCTTCAGCCACATTTACATGTCTTGAATCAGCTGAAGCATTTGTTCTTGATGCTGAACATTTGAAATACATCACTGATCATTTTCGGTACAAATTTGCAAATGAGAGGTTAAAGAGAACAGCAAGATATTACTCATCTAACTGGAGAACATGGGCTTCTGTCAATATTCAAATTGCTTGGAGACGATACAGGAATAGGACTAGAGGTCCAGTGACCCCTGTAAGGGACAATGATGTTGGAGGCACTGAACGAAGACTCTTGCAATATGCTGCAATGTTTATGTCAATTAAGCCTCATGATCATCTTGAATGA 2142 0.4608 MPSFSSLPGSIGGRFFGRNPDSTAGNGGDSSSDTVVVHDDSSPAIDTVECYACTQLGVPAFHSTSCDSYQQPQWEASAGSSLVPIQNQSKGSTVRVRSRINSGPFGLVLDPRTKHVQVWNRALLLARGVALAIDPLFFYALSIGREGTPCLYMDGWLAAVVTVARSIVDAVHLIHLWLQFKMAYVSRESLVVGCGKLVWDARDIAAHYLRSLKGFWFDLFVILPVPQTVFWLIVPKLIREERLKIIMTIMLLIFLFQFLPKVYHCICMMRRMQKVTGYVFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCERTHGCNLSLSCAEEVCYQFMSSDGTVGTPCGGNSTIAARKPLCLNGEGPFKFGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICTVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMSRRQLPSRLKKRVRHFERQRWAAMGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPRVLTKDEKIIREGDPVPRMVFIVSGRIKRNQSLSKGIVASSILEPGGFLGDELLSWCLRRPFMERLPASSATFTCLESAEAFVLDAEHLKYITDHFRYKFANERLKRTARYYSSNWRTWASVNIQIAWRRYRNRTRGPVTPVRDNDVGGTERRLLQYAAMFMSIKPHDHLE* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1187 713 Gene3D - 149 447 - -
Lan11g1187 713 Pfam Ion transport protein 117 442 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan11g1187 713 Gene3D Jelly Rolls 522 640 IPR014710 -
Lan11g1187 713 ProSiteProfiles cAMP/cGMP binding motif profile. 524 603 IPR000595 -
Lan11g1187 713 SMART cnmp_10 524 650 IPR000595 -
Lan11g1187 713 SUPERFAMILY cAMP-binding domain-like 451 638 IPR018490 -
Lan11g1187 713 MobiDBLite consensus disorder prediction 1 38 - -
Lan11g1187 713 CDD CAP_ED 524 631 IPR000595 -
Lan11g1187 713 Gene3D Helix hairpin bin 450 515 - -
Lan11g1187 713 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 51 713 - -
Lan11g1187 713 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 51 713 - -
Lan11g1187 713 MobiDBLite consensus disorder prediction 23 38 - -
Lan11g1187 713 SUPERFAMILY Voltage-gated potassium channels 111 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1187 Lan-Chr11 17051792 17067691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1187 41 713 Ion Channels AT5G15410 77.680 0.0 1051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1187 K05391 - gmx:100798823 1156.74