Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1182 ATGTCCACTCCCAACGCCGATTCCGCCACGGCGCCTCCGCGTCCCACAATTACTCTCCCTCCTCGCCCCTCCGCCGAGGCCTTCTTCGCCGCCGGTGGCGTCAGCCCCGGCCCCATGACCCTAGTCTCCAACTTCTTCTCCGATAGCGTCTACTCCGACACCGACTGCCGTTCCTTTTCTCAGCTCCTCGCCGGAGCTATGGCCTCTCCCCTTGCGTTCGGTGCAGCTCGGCCCCTTATCTTCCCTACCACCGACAATTCCGGCGAAGATGACGGTGGGACCCATAAGAGTTTGGGGTTCAAACAAAGTAGACCCATGAATTTGGTAGTTGCTCGTTCTCCAATGTTCACAATCCCTCCAGGGTTGAGCCCTTCTGGGTTTCTCAACTCGCCTGGGTTCTTTTCGCCACATAGCCCATTTGGAATGTCTCACCAACAGGCATTAGCACAGGTTACAGCTCAAGCTGTACTAGCACAATCTCATATGCACATGCAAGCTGATTATCATCCATCTGCTGCAATAAATGCTTCCACCGAGCCATCGGTCGAGCAGCCATCTTTTTCTCTAAATGAAGCTTCAGAGCAGCAAGTGTTACCATCTGTATCAGAACCTATGAATGCTCAACCAGGAACATCAGAGCTTACTCAAACTGATAAGAAATATCAACCATCTTCCCTGGCCATTGACAAACCTGCCGATGATGGCTACAACTGGCGTAAGTATGGGCAGAAGCATGTTAAAGGCAGTGAGTATCCACGGAGCTACTACAAGTGTACCCATCTGAATTGCCCTGTGAAGAAAAAAGTTGAGCGTGCACCCGATGGTCGCATAACTGAAATTATCTACAAAGGCCAACATAACCATGAAAAGCCTCAGGGAAATAGGCGTGTAAAAGATAACAGTGATTCAAATCTAAATGGAAGTGTTCAACCCAATACTAATCCAAACTCTCAAGGTTGGGTAGGAAGTTCAACCAAGTTTGAAGAAAGCATGCCTGATTGTTCAGTGCCTGAACATGACTTGACGTCCAATCCGGGAGCTTCCAGGCAACTACCTGGATCAACTGTGAGTGAGGAAGCAGGCGATGTAGAAAATAGGGATGTGGGAGATGATAAGGAGCCAAACCTGAAGAGAAAGAACACTGAGCTTGTGGTTTCTGAAGCACCTCTTTCCCAGAAGACTGTCACAGAGTCCAAAATCATTGTACAAACAAGAAGCGAAGTTGATCTTTTGGATGATGGCTACAGATGGCGAAAGTATGGTCAGAAAGTGGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGTACTAGTGCAGGATGCACAGTGCGTAAACATGTTGAGAGAGCTTCAACTGACCCCAAAGCTGTTGTAACTACATATGAGGGAAAACATAACCATGATGTGCCTGCTGCTAGAAACAGCAGCCACAACACAACCAGTAGCAATTCAATGGCATTAAAACCGCATAACGTGGTGCCCGAGAAGCATCCTTTGCTTAAAGATATGGATTTTGGAAGTAATGACCAAAAACCGGTACATTTACGCTTAAAAGAAGAACAAATTATAGTATAA 1578 0.474 MSTPNADSATAPPRPTITLPPRPSAEAFFAAGGVSPGPMTLVSNFFSDSVYSDTDCRSFSQLLAGAMASPLAFGAARPLIFPTTDNSGEDDGGTHKSLGFKQSRPMNLVVARSPMFTIPPGLSPSGFLNSPGFFSPHSPFGMSHQQALAQVTAQAVLAQSHMHMQADYHPSAAINASTEPSVEQPSFSLNEASEQQVLPSVSEPMNAQPGTSELTQTDKKYQPSSLAIDKPADDGYNWRKYGQKHVKGSEYPRSYYKCTHLNCPVKKKVERAPDGRITEIIYKGQHNHEKPQGNRRVKDNSDSNLNGSVQPNTNPNSQGWVGSSTKFEESMPDCSVPEHDLTSNPGASRQLPGSTVSEEAGDVENRDVGDDKEPNLKRKNTELVVSEAPLSQKTVTESKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCTVRKHVERASTDPKAVVTTYEGKHNHDVPAARNSSHNTTSSNSMALKPHNVVPEKHPLLKDMDFGSNDQKPVHLRLKEEQIIV* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1182 525 MobiDBLite consensus disorder prediction 176 236 - -
Lan11g1182 525 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 524 IPR044810 GO:0003700
Lan11g1182 525 Pfam WRKY DNA -binding domain 233 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g1182 525 Pfam WRKY DNA -binding domain 412 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g1182 525 Gene3D WRKY domain 221 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g1182 525 Gene3D WRKY domain 395 472 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g1182 525 MobiDBLite consensus disorder prediction 467 489 - -
Lan11g1182 525 SMART WRKY_cls 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g1182 525 SMART WRKY_cls 411 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g1182 525 ProSiteProfiles WRKY domain profile. 227 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g1182 525 MobiDBLite consensus disorder prediction 282 374 - -
Lan11g1182 525 ProSiteProfiles WRKY domain profile. 406 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g1182 525 SUPERFAMILY WRKY DNA-binding domain 231 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g1182 525 MobiDBLite consensus disorder prediction 1 23 - -
Lan11g1182 525 MobiDBLite consensus disorder prediction 473 489 - -
Lan11g1182 525 SUPERFAMILY WRKY DNA-binding domain 403 471 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g1182 525 MobiDBLite consensus disorder prediction 360 374 - -
Lan11g1182 525 MobiDBLite consensus disorder prediction 176 223 - -
Lan11g1182 525 MobiDBLite consensus disorder prediction 341 355 - -
Lan11g1182 525 MobiDBLite consensus disorder prediction 282 297 - -
Lan11g1182 525 PANTHER WRKY PROTEIN 10 524 - -
Lan11g1182 525 MobiDBLite consensus disorder prediction 298 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1182 Lan-Chr11 16960282 16978481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1182 8 523 WRKY Transcription Factor Family AT2G03340 51.941 3.33e-147 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan11g1182 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1182 - - aip:107635357 817.379