Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1181 ATGGGTTGTGTTAACTCCAAGAAAGCGGTTGCCGGAGACAATTCTTCACCACCACGACTTCCATCGCGACCGCAATCGCAATCCAGTTCGCGAAACCGGAGCAATGCGTCTAGCCGACACAGAACCACGGTCGCCGAGGCGGTGTCGGCGGCCACCGTGGCGGTGCAGTCGTCAAGAGGAAGCGGTAATTCCGTGGCGGTGGTTTTGGAGGGAAAGGAAAGCGAGGCGAAATCGGAGCAAAGGGTAATTGAGAATGAAGGAAGTGTGAGGGCAAAAGGGTCATTGAACATGAGGATTGGGATATGTTATAGGTCTGTGGAAGGAGAACAGAATGCAGCTGGTTGGCCACCTTGGCTAACATCTCTTGCAGGGGAAGCTATTCAAGGGTGGGTCCCACTCAAGACTGGTTCTTATGAGAGATTAGATAAGATCGGAGAAGGTACTTATAGCAGTGTGTTCCAAGCACGTGAAACTGAAACTGGGAGGATAGTTGCGCTGAAGAAGGTGCGCTTTAACAATTTTCAACCTGAGAGTATTAGGTTCATGGCAAGAGAAATAATAATTCTTCGCGCACTTGACCACCCAAACATCATGAAATTAGAGGGTATAATTACTTCCCCGCTATCAAGTAGCATATACCTTGTATTTGAATACATGGAGCATGATCTTGCTGGCCTTTTATCTTCTCCCAACATCAAGTTCAGTGACTCACAGATTAAATGTTACATGAGGCAGCTATTAAGTGGAATTGAGCACTGTCACCTTCGAGGTATTATGCATCGAGACATTAAAGTATCCAATATATTAGTAAACAATGAAGGTGTTCTCAAGATAGGAGATTTTGGATTAGCTAATGCAGTTAGCCCAAATAACAAGCATCCTTTAACGAGTCGTGTAGTGACTCTATGGTATCGTCCTCCTGAGCTCTTGATGGGATCAACACAATATGGAGTTTCAGTGGATCTGTGGAGTGTAGGCTGTGTATTTGCAGAGCTTTTTCTGGGGAAGCCCATCCTTAAGGGGAGAACTGAGGTCGAACAATTACATAAAATTTTTAAGCTTTGCGGGTCTCCACCTGCTGAGTTCTGGAAAAAGTGTAAGCTTCCTCTTGCAAGAATGTTTAAGCCTCAAACTAATTATGAAAGCACTTTTCAAGAGAGGTGTAATGGTTTTCCTGTAACTGCTGTAAAACTAATTGAGACTTTACTGTCCATTGACCCCTACAAGCGTGGGACTGCCTCCTCTGCACTAATATCTAAGTATTTCAACACCGAGCCATATGCCTGTAGTCCATCAATGTTACCGAAGTATCCTCCAAGCAAAGAGATGGATGCTAAAATTCGGGAAGATGCACAAAGGAAAAAGAATGGGGGTAAAGTAGGAGAGGCTGTAACATCAAGAAAACAAAGACAAGTCTATAAATTCTTGCAAGACCCGAACAATTACAGCAAACCAGCTATAAAAGAGAACATTTCTCAAAACGCTTCTAGAAATGATGGTAAAACACATCTTACAAAGGGTAAAGTAGGATCCATGCACCAAAGCCACCAATTGAACCGTTTATACTCAGGACCAGCACCAGTCACAGGATCTAGTGGCTTTACATGGACAAAAAGGAGAAAACCAGCTGCTTCATCCACATTATCGGATAGCTCGAGAAGCAAAATCAGTGCACTGGATCCAACCTTTGCAAAAGGAACGTATGATTTAACAAAACATGGGATAGATGTTACAAAAAGAAAATATAGTTCCAACTCAAGGCGTCAGGATGAGAATTCCAAGCATGTAGTGCATAAGAATCTAAATCGTCATGATCGTCGAGGGTCGTTTGATTCAGCTGATACATACCATTCAAATCATTACATGGATTTCGTTCCCACACAAAAAACAGACACTCAATTAAGCAACGAGCTTTTACAGGGCCACAGGAAACATGATGAGCCTATGGAACAATCAGTACCAATAGTGATCCAAGAAAATAAAAATGATGAGTTGTTCCATTGGGATGAAAATGCTATGCGGCGATCAGTTCGTAAATCAAGGTTTGGAAAAGACAAATGA 2061 0.4294 MGCVNSKKAVAGDNSSPPRLPSRPQSQSSSRNRSNASSRHRTTVAEAVSAATVAVQSSRGSGNSVAVVLEGKESEAKSEQRVIENEGSVRAKGSLNMRIGICYRSVEGEQNAAGWPPWLTSLAGEAIQGWVPLKTGSYERLDKIGEGTYSSVFQARETETGRIVALKKVRFNNFQPESIRFMAREIIILRALDHPNIMKLEGIITSPLSSSIYLVFEYMEHDLAGLLSSPNIKFSDSQIKCYMRQLLSGIEHCHLRGIMHRDIKVSNILVNNEGVLKIGDFGLANAVSPNNKHPLTSRVVTLWYRPPELLMGSTQYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLHKIFKLCGSPPAEFWKKCKLPLARMFKPQTNYESTFQERCNGFPVTAVKLIETLLSIDPYKRGTASSALISKYFNTEPYACSPSMLPKYPPSKEMDAKIREDAQRKKNGGKVGEAVTSRKQRQVYKFLQDPNNYSKPAIKENISQNASRNDGKTHLTKGKVGSMHQSHQLNRLYSGPAPVTGSSGFTWTKRRKPAASSTLSDSSRSKISALDPTFAKGTYDLTKHGIDVTKRKYSSNSRRQDENSKHVVHKNLNRHDRRGSFDSADTYHSNHYMDFVPTQKTDTQLSNELLQGHRKHDEPMEQSVPIVIQENKNDELFHWDENAMRRSVRKSRFGKDK* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1181 686 MobiDBLite consensus disorder prediction 1 42 - -
Lan11g1181 686 MobiDBLite consensus disorder prediction 483 500 - -
Lan11g1181 686 Pfam Protein kinase domain 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1181 686 SUPERFAMILY Protein kinase-like (PK-like) 132 427 IPR011009 -
Lan11g1181 686 SMART serkin_6 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1181 686 MobiDBLite consensus disorder prediction 521 554 - -
Lan11g1181 686 Gene3D Phosphorylase Kinase; domain 1 127 220 - -
Lan11g1181 686 ProSiteProfiles Protein kinase domain profile. 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1181 686 CDD STKc_CDK9_like 138 422 - -
Lan11g1181 686 ProSitePatterns Protein kinases ATP-binding region signature. 144 167 IPR017441 GO:0005524
Lan11g1181 686 PANTHER CYCLIN-DEPENDENT KINASE 66 575 - -
Lan11g1181 686 Gene3D Transferase(Phosphotransferase) domain 1 221 461 - -
Lan11g1181 686 MobiDBLite consensus disorder prediction 18 42 - -
Lan11g1181 686 MobiDBLite consensus disorder prediction 483 507 - -
Lan11g1181 686 PANTHER CELL DIVISION PROTEIN KINASE 66 575 - -
Lan11g1181 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1181 Lan-Chr11 16930667 16940781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1181 130 454 Core Cell Cycle Gene Families AT5G10270 46.628 5.93e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lan11g1181 Pkinase 2.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1181 - - lja:Lj1g3v2982400.1 913.679