Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1173 ATGGCAGCTTGCATATTCACGGTATCACAGAACGGAAACGGAGATTTCCAAACGGTGCAGGAAGCAATCGACGCCGTGCCACTCGGAAACACTCGCCGGACTTTGATCCGTGTGGCGCCGGGAATCTACCGGCAACCGGTGTACGTTCCAAAGACGAAGAATTTCATAACTCTTGCTGGTTTGCGCCCTGAGGACACTCTTCTTACTTGGAATAACACCGCCGCAGGAATCGATCACCACCAACCTGCTAGGGTGATAGGGACTGGGACATTTGGCTGCGGAAGTACCATTGTAGAAGGGGAGGACTTCATTGCCGAGAATATTACTTTTGAGAATTCTTCACCTGAGGGTTCAGGGCAAGCAGTGGCAATTAGAGTAACAGCAGATAGATGTGCCTTCTATAATTGCCGGTTCCTTGGATGGCAGGACACATTGTACTTACATTATGGAAAACAATATTTGAAAGATTGCTATATTGAAGGAAATGTGGACTTCATCTTTGGCAATAGCACTGCTCTTTTGGAGCACTGCCATATCCACTGCAAATCTGCTGGGTTCATAACCGCACAGAGCAGAAAATCTTCACAGGAAACAACTGGTTATGTATTCTTGAGATGTGTTATCACAGGTAATGGAGGAAATTCATATGTATATCTTGGACGACCATGGGGACCTTTTGGAAGAGTGGTCTTTGCTTACACATACATGGATCCATGCATAAAGCATGTTGGATGGGATAATTGGGGGAAAACAGAGAATGAGAGAAGCGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCAAACAAACGAGCAACATGGTGTAGAGAATTGATGGATGAAGAAGCAGACCAGTTCCTGATGCATCCTTTTATTGACCCAGAACCTGATAGACCTTGGCTTGCTCAAAGAATGGCTTTGAGGATTCCATATTCTGCTTAA 951 0.4532 MAACIFTVSQNGNGDFQTVQEAIDAVPLGNTRRTLIRVAPGIYRQPVYVPKTKNFITLAGLRPEDTLLTWNNTAAGIDHHQPARVIGTGTFGCGSTIVEGEDFIAENITFENSSPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGNVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSSQETTGYVFLRCVITGNGGNSYVYLGRPWGPFGRVVFAYTYMDPCIKHVGWDNWGKTENERSACFYEYRCFGPGCCPNKRATWCRELMDEEADQFLMHPFIDPEPDRPWLAQRMALRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1173 316 Gene3D - 3 309 IPR012334 -
Lan11g1173 316 SUPERFAMILY Pectin lyase-like 3 302 IPR011050 -
Lan11g1173 316 PANTHER PECTINESTERASE 1 315 - -
Lan11g1173 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Lan11g1173 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1173 Lan-Chr11 16847081 16860747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1173 5 309 Carbohydrate Esterase AT5G47500 37.898 9.03e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1173 K01051 - gmx:100786786 634.024