Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1162 ATGGATATGTTGAGGAAGTTGAAGAAGATCAACTATGGGCTCACCAAGCCAATTATCTGTCAAAAAGTTGATTCTCTGGCCATCACGAACGATCCAGTAGGAGTTAATCATAGCCAAATTCCTATTGTCCTTGATGCCATGCTAGATAGAGGATTTGTATTATCTAGAAGGGGTGTCCCTTTTGCAGCCAAATCTGGACCTGTACAATATGGTCCATTCTTGATTGGAAGAGATCATCTCCCAATGCTTGATTTGTCTCAAAATCCTTACTTGGTGAGTGAGATTCCTAAGGATATTGGTGAACTTGGAAGCTTAAAGAAACTTTTGCTTCAAAGTTCTTCTTTTCAAGGTGAGATTCCAGGTTCTTTGTTGGGTTTGCATAGTTTAACTGATTTGGATCTTTCTGATAATAATCTAACAGGTTTGGTTCCAAAGTTTCTAGCTTCTTCTCTTGAGAATCTAGTTTTCTTTGATGTTTCACAGAACAAGCTTTCAGGGCCATTTCCAAATGGAATTTGTAAAGGCCTTGTTATAAATCTCAGCCTCCACACAAATATTTTCACAGGTTCTTTACCAAACAATTCTATTAGTGAATGTACGAGTCTAGAGAGATTCCAAGTTCAGAACAATGGTTTCTATGGTAATTTCCCTAATGAGCTTTTTTCATTACCTAAAATCAAGCTCATAAGAGCTGAAAACAATAGATTTTCTGGTCAAATACCTGAGTCAATATCAAAAGCTGTTTTTTTGGAACAAGTTCAGCTTGACAATAACAGCTTTTCAGGTCAAATCCCTTCAGGCCTTGGCTTTGTCAAGACCTTATACAAATTCTCAGCTTCTCTCAATCATTTCTATGGTGAAATTCCTCCAAATTTCTGTGACTCACCAGTTATGAGCATAGTAAACCTCTCTCACAATTCACTTTCTGGTAAAATTCCTCAGCTGAAAAAATGCAGAAAACTAGTATCATTGTCTTTATCTGATAACACTTTAACTGGAGAAATACCAACTTCACTTGCTGAGTTACCAGTGTTAACTTACCTTGATCTTTCACATAACAACCTCACTGGTTCAATTCCACAAGGGCTGCAAAACTTGAAACTTGCACTTTTCAATGTTTCCTTCAATCATCTTTCTGGTGAAGTACCATACTCTTTGATTTCAGGTCTACCTGCCTCATATTTGGAGGGTAACCCTGCACTTTGTGGTCCTGGTTTACCAAACTCATGTTCTAATGATTATATGCCAAGACATCATAGTATTGGTGTTACAACATTAACATGTGCATTGATTGTTCTAGCATTTGTTGTTGGAATTGCCTTTGTTGTTGGTGGATTTATGTTGTATAAGAGATCCTGCAAGGGGAATGATAATGAAGTAGGTGTTTTTCGGTCGGTGTTCTTTTATCCTCTAAGAATCACTGAGAATGATTTGCTTATAGGGATGAATGAGAAAAGCTCATTAGGGAAAGGTGGAGTTTTTGGTGAAGTTTATGCTGTTAGTTTGCCTAGTGGTGAACTTATAGCTGTGAAGAAATTAGTTAATTTCGGAAACCGATCTTCGAAGAGTTTGAAAGCCGAGATGAAGACTATGGCAAGGATTAGGCATAGAAACATTGTTAAAATTCTGGGGTTCTGCCACTCAGATGAGTCAGTTTTGATCATTTATGAGTATTTGAATGAAAAAAGCTTAGGTGATTTGATTTCAAGTCAGAATTTTGAGTTACAATGGGGATTTAGATTGAGAATTGCTATTGGAGTTGCTCAAGGACTTGCTTATATTCACAAAGATTATGTTCCACACTTGCTTCATAGAAATGTTAAGTCAAATAATATTCTATTGGATGCAAATTTTGAGCCAAAAATCACTGATTTTGCTCTTGATAGAGTTTTGGGAGAATCTGCTTTTAAGTCAACTTTGGATTCTGAAGGTGGATCTTCATGTTATAATGCACCAGAATATGGTTACAATAAGAAACCAACTGAAGAATTAGATGTGTATAGTTTTGGTGTTATATTGCTAGAGCTAGTAACTGGAAAACAAGCAGAACCAAAAGAAGCAAGTGATGATTCCCTTGACATAGTAAAATGGGTTAGAAGAAAAGTGAATATAACTAATGGGGTGCAACAAGTTCTTGACCCTAGAATATCACATACTTTTCACCATGCAATGATTGAAGCTTTGGATATAGCTCTTAGTTGCACTTCTGTGTTGCCTGAGAAAAGACCATCAATGGTTGAAGTTGTTAGAGATCTTCAGTCTCTTGAATCAAGAACTTGCATTGCAAATTTGCAACTTCCAAGTGAGGGACATGTTCCTATGTGA 2325 0.3669 MDMLRKLKKINYGLTKPIICQKVDSLAITNDPVGVNHSQIPIVLDAMLDRGFVLSRRGVPFAAKSGPVQYGPFLIGRDHLPMLDLSQNPYLVSEIPKDIGELGSLKKLLLQSSSFQGEIPGSLLGLHSLTDLDLSDNNLTGLVPKFLASSLENLVFFDVSQNKLSGPFPNGICKGLVINLSLHTNIFTGSLPNNSISECTSLERFQVQNNGFYGNFPNELFSLPKIKLIRAENNRFSGQIPESISKAVFLEQVQLDNNSFSGQIPSGLGFVKTLYKFSASLNHFYGEIPPNFCDSPVMSIVNLSHNSLSGKIPQLKKCRKLVSLSLSDNTLTGEIPTSLAELPVLTYLDLSHNNLTGSIPQGLQNLKLALFNVSFNHLSGEVPYSLISGLPASYLEGNPALCGPGLPNSCSNDYMPRHHSIGVTTLTCALIVLAFVVGIAFVVGGFMLYKRSCKGNDNEVGVFRSVFFYPLRITENDLLIGMNEKSSLGKGGVFGEVYAVSLPSGELIAVKKLVNFGNRSSKSLKAEMKTMARIRHRNIVKILGFCHSDESVLIIYEYLNEKSLGDLISSQNFELQWGFRLRIAIGVAQGLAYIHKDYVPHLLHRNVKSNNILLDANFEPKITDFALDRVLGESAFKSTLDSEGGSSCYNAPEYGYNKKPTEELDVYSFGVILLELVTGKQAEPKEASDDSLDIVKWVRRKVNITNGVQQVLDPRISHTFHHAMIEALDIALSCTSVLPEKRPSMVEVVRDLQSLESRTCIANLQLPSEGHVPM* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1162 774 Gene3D Phosphorylase Kinase; domain 1 476 558 - -
Lan11g1162 774 Gene3D Transferase(Phosphotransferase) domain 1 559 765 - -
Lan11g1162 774 Pfam Leucine Rich repeat 127 141 IPR001611 GO:0005515
Lan11g1162 774 ProSiteProfiles Protein kinase domain profile. 483 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1162 774 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 79 763 - -
Lan11g1162 774 SUPERFAMILY L domain-like 77 411 - -
Lan11g1162 774 PRINTS Leucine-rich repeat signature 129 142 - -
Lan11g1162 774 PRINTS Leucine-rich repeat signature 342 355 - -
Lan11g1162 774 Pfam Protein kinase domain 484 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g1162 774 Gene3D Ribonuclease Inhibitor 178 413 IPR032675 -
Lan11g1162 774 Gene3D Ribonuclease Inhibitor 72 177 IPR032675 -
Lan11g1162 774 ProSiteProfiles Leucine-rich repeat profile. 344 367 IPR001611 GO:0005515
Lan11g1162 774 SMART LRR_typ_2 342 365 IPR003591 -
Lan11g1162 774 SMART LRR_typ_2 126 149 IPR003591 -
Lan11g1162 774 SMART LRR_typ_2 151 175 IPR003591 -
Lan11g1162 774 SUPERFAMILY Protein kinase-like (PK-like) 487 757 IPR011009 -
Lan11g1162 774 Pfam Leucine rich repeat 319 378 IPR001611 GO:0005515
Lan11g1162 774 PANTHER OSJNBB0022F23.6 PROTEIN 79 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1162 Lan-Chr11 16515621 16520092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1162 72 755 Receptor kinase-like Gene Family AT5G06940 60.958 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan11g1162 Pkinase 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1162 - - lang:109355886 1091.64