Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan11g1155 | ATGGAAAAGCTAGCTCCTCCTATCTTCATCCACAAAACAAAACTTCCAACTTCATATCATGATTCATCTTCATCCATGACGATTAATAATACTAAGAAGCGTGATCTGTCACATGATTTGTTTCAAAACCAAACCACTAACGAAAATTGGAACCCAAAGGCTTGGTCTTGGGACAGTGTCAATTTTCTGAGCAAACCCTTGACCCAAAACAAAGAGGTTGATGATGAAACAGTACTAGAGTTGAATCTTGGTCGTGGTGAACCTGACCCAACGGTGGTTCGGCCTAATAAAAAGGTGCGGTCTGGTTCACCTTCTTCGGCTACGACGTCGTATCCTACGTGTCAGGTGGATAACTGTAGAGAAGATCTGTCAAGTGCTAAAGATTATCATCGCCGCCATAAAGTTTGTGAGCTTCATAGCAAAGCCTCTAAAGCTCTTCTATCTAATCAATTGCAAAGGTTTTGCCAACAGTGTAGCAGATTTCACCCTCTGTCGGAGTTTGATGAAGGGAAGCGGAGTTGTAGGCGAAGACTTGCTGGGCATAATCGTCGGAGAAGAAAAACACAACAGGAAGATGTTACGTCACAGCCAGAGAATGTGACTACAGGCAATATGGAAATTTGTAGCTTGTTGACTGCAATAGCTCGTTCGCAAGGGAAATTTGAGGAAATAAGTAAGATTGGCTCACAAGTTCCACAAGATAAAGATCATCTTTTTCAGATTCTTAATAGGTTGGCTTTGCCAGCTGATCTGGCCTTGAAGTTGCTCAATGTTGGTAATTTCAATGGCAATGTGCAAACTTCATCCTATGATCATGACAAACTGAACCAGAGCACCGCCCCATTAACTAAGGACCTACTTGCTGGTCTTTCGACTGCTCTGTCGACATCTGTTCCGGATGCAACTGCATCACTATCTCAAAATTGCAGTCAGAGTAGTGGCAGCGAGAAATCTAGGACTAGTGCTGAACAAATTGTTGGAGCAAATTTACAAACAAGAAGGCCAACACTAGAATTCACTTCAGTTGGAGGAGAAAGAAGTAGTGGTAGTTCCCAGTCACCTGTTGAAGATTCGGATTGCCCAGAAGTTCGAGTGAATTTACCGTTGCAACTATTTAGCTGCTCTCCAGAAAATGAATGCCTTCCAAAAATGGTATCATCACAAAAGTATTTTTCATCTGATAGCAGTAACCCTGTGGAAGAGAGGTCACTATCATCTTCTCCTCCTGTTATGGAGAAGCAGTTTAATTTGCAGGGTGTGACAAGAGGTCTCAACCCTGAGAGCTTTTCAATTAGAAGAGAAATCAATGCAAACAAGGAAGCTAGGCAAAATCTTAGTTGTAATATCTCTCTTCACCTTTCCAATGGGTCAAATAGCAGAATCCAACCTGGTTCACTTCAAAGTGTACCATTTCAACCTGGGTATGCATCTTCGGGCTCTGACCATTCACCTCCTAGTTTGAATTCAGATGCTCAGGATCGAACTGGGAGAATAATGTTTAAACTATTTGACAAGGATCCTAGCCATTTCCCAGGAACACTGCGAACACAGATTTACAACTGGCTTTCTAGTAGGCCGTCAGACTTGGAGAGCCACATAAGGCCTGGCTGTGTGGTCTTATCAGTTTATGCTACAATGTCCTCTGCTGCCTGGGAGCAACTAGAAGAAAACTTCCTTCAACGTGTTCATTCTTTACTTCAAAATTCAAATTCTGATTTTTGGAGGAATGGAAGGTTTCTGGTTCATTCTGGCAGTCGGTTAGCGTCGCATAAAGATGGAAATATTCGCTTATGCAAACCATGGAGAACATGGAGGTCTCCAGAGGTGATATCAGTGTCCCCTTTGGCAATTGTTAGTGGTCAAGAAACCTGTATTTCATTGAAGGGTAGAAATCTGTCAACTCCAGGCACCAAGATTCATTGTACAGGTACTGGCCGTTATACATCGGAGGAAGTTATAGGATCTGCATATCATGGTAATACATATGATAAGATAAAACTAAGTGGTTTTAAAGTTCAGAATGCATCTGGTGTTCTGGGTCGCTGTTTCATTGAGGTTGAAAATGGTTTCAAGGGTGACAGCTTTCCAGTGATAATAGCTAATTCAACCATTTGTAAGGAATTGAGACCGCTCGAGTCTGAATTTGATTCGGAGGAAGTATGCGATGCCATTTCTGATGAGCATGAAAATGATTATGGAAGGCCCAGATCTAGGGAAGAAGCTTTGCACTTCTTGAATGAGCTTGGCTGGCTGTTCCAGAGAGAAAGGTTTCAGAATGTGCATGAGGTGCAAGATTATTCACTGGATAGGTTCAAGTTTGTACTCACCTTTGCTGTGGAAAGGAACTGTTGTATGTTAGTCAAAACCCTTCTGGATTTGCTGGTTGATAAACACTTAGAAGGGGAATCATTGTCAGCGAGTTCAGTGAATATGCTTAATGCAATTCAACTGTTAAATAGAGCAGTGAAAAGAAAATACAGAAACATGGTTGATTTGCTCATCTGTTATTCGATACCTCTAAAAAATGAGACATCAAGGAGATTTGTATTTCCTCCTAATGTCGGGGGCCAAGATGGAATTACACCTTTGCACTTGGCAGCATGCACATCAAATTCTGAGGGCGTAATTGACTCTTTAACCAATGATCCACAGGAGATTGGGTTGAAGTGCTGGGAATCCCTAGTGGATGTAAATGGGCAGACTCCACATGCCTATGCCATGATAAGGAATAATCACTTTTATAATGTGCTGGTTGCTCGCAAGCATGCTGATAAACAAAGAGGTCAAGTTTCATTAACAATGGACAATGAGATAGGACAATCATCACTGAGAATTGAGCTCAGGCAAAAGCAAGGTAACAAAGTGAAGCGAGGCCAAAATTCTTGTGTGAAGTGTGTGATGGCAGAAAGTCATTCCTACAGGAAAGTTCCCGCTTCACGGGGCTTTATCCAGCGTCCTTTTATCCATTCAATGCTAGCTGTTGCCGCTGTATGTGTATGTGTATGTCTGTTCATGCGCGGAGCCCCTTCCATAGGCTCAGTTGCTCCCTTCAGGTGGGAAAAAATGGATTATGGCACACATTAG | 3084 | 0.4228 | MEKLAPPIFIHKTKLPTSYHDSSSSMTINNTKKRDLSHDLFQNQTTNENWNPKAWSWDSVNFLSKPLTQNKEVDDETVLELNLGRGEPDPTVVRPNKKVRSGSPSSATTSYPTCQVDNCREDLSSAKDYHRRHKVCELHSKASKALLSNQLQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQQEDVTSQPENVTTGNMEICSLLTAIARSQGKFEEISKIGSQVPQDKDHLFQILNRLALPADLALKLLNVGNFNGNVQTSSYDHDKLNQSTAPLTKDLLAGLSTALSTSVPDATASLSQNCSQSSGSEKSRTSAEQIVGANLQTRRPTLEFTSVGGERSSGSSQSPVEDSDCPEVRVNLPLQLFSCSPENECLPKMVSSQKYFSSDSSNPVEERSLSSSPPVMEKQFNLQGVTRGLNPESFSIRREINANKEARQNLSCNISLHLSNGSNSRIQPGSLQSVPFQPGYASSGSDHSPPSLNSDAQDRTGRIMFKLFDKDPSHFPGTLRTQIYNWLSSRPSDLESHIRPGCVVLSVYATMSSAAWEQLEENFLQRVHSLLQNSNSDFWRNGRFLVHSGSRLASHKDGNIRLCKPWRTWRSPEVISVSPLAIVSGQETCISLKGRNLSTPGTKIHCTGTGRYTSEEVIGSAYHGNTYDKIKLSGFKVQNASGVLGRCFIEVENGFKGDSFPVIIANSTICKELRPLESEFDSEEVCDAISDEHENDYGRPRSREEALHFLNELGWLFQRERFQNVHEVQDYSLDRFKFVLTFAVERNCCMLVKTLLDLLVDKHLEGESLSASSVNMLNAIQLLNRAVKRKYRNMVDLLICYSIPLKNETSRRFVFPPNVGGQDGITPLHLAACTSNSEGVIDSLTNDPQEIGLKCWESLVDVNGQTPHAYAMIRNNHFYNVLVARKHADKQRGQVSLTMDNEIGQSSLRIELRQKQGNKVKRGQNSCVKCVMAESHSYRKVPASRGFIQRPFIHSMLAVAAVCVCVCLFMRGAPSIGSVAPFRWEKMDYGTH* | 1028 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan11g1155 | 1027 | MobiDBLite | consensus disorder prediction | 303 | 357 | - | - | |
Lan11g1155 | 1027 | Pfam | SBP domain | 114 | 187 | IPR004333 | GO:0003677 | |
Lan11g1155 | 1027 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 | 34 | 1026 | IPR044817 | GO:0003677 | |
Lan11g1155 | 1027 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 14 | 34 | 1026 | - | - | |
Lan11g1155 | 1027 | MobiDBLite | consensus disorder prediction | 389 | 410 | - | - | |
Lan11g1155 | 1027 | MobiDBLite | consensus disorder prediction | 83 | 111 | - | - | |
Lan11g1155 | 1027 | Gene3D | - | 105 | 175 | IPR036893 | GO:0003677|GO:0005634 | |
Lan11g1155 | 1027 | SUPERFAMILY | Ankyrin repeat | 774 | 924 | IPR036770 | - | |
Lan11g1155 | 1027 | MobiDBLite | consensus disorder prediction | 462 | 491 | - | - | |
Lan11g1155 | 1027 | SUPERFAMILY | SBT domain | 112 | 192 | IPR036893 | GO:0003677|GO:0005634 | |
Lan11g1155 | 1027 | Gene3D | - | 762 | 964 | IPR036770 | - | |
Lan11g1155 | 1027 | MobiDBLite | consensus disorder prediction | 178 | 199 | - | - | |
Lan11g1155 | 1027 | ProSiteProfiles | Ankyrin repeat profile. | 858 | 879 | IPR002110 | GO:0005515 | |
Lan11g1155 | 1027 | ProSiteProfiles | Zinc finger SBP-type profile. | 111 | 188 | IPR004333 | GO:0003677 | |
Lan11g1155 | 1027 | MobiDBLite | consensus disorder prediction | 303 | 360 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan11g1155 | Lan-Chr11 | 16134060 | 16139862 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan11g1155 | 3 | 1026 | SBP-box Gene Family | AT1G20980 | 50.889 | 0.0 | 926 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | SBP | Lan11g1155 | SBP | 1.2e-29 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan11g1155 | - | - | lang:109360589 | 2021.9 |