Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1155 ATGGAAAAGCTAGCTCCTCCTATCTTCATCCACAAAACAAAACTTCCAACTTCATATCATGATTCATCTTCATCCATGACGATTAATAATACTAAGAAGCGTGATCTGTCACATGATTTGTTTCAAAACCAAACCACTAACGAAAATTGGAACCCAAAGGCTTGGTCTTGGGACAGTGTCAATTTTCTGAGCAAACCCTTGACCCAAAACAAAGAGGTTGATGATGAAACAGTACTAGAGTTGAATCTTGGTCGTGGTGAACCTGACCCAACGGTGGTTCGGCCTAATAAAAAGGTGCGGTCTGGTTCACCTTCTTCGGCTACGACGTCGTATCCTACGTGTCAGGTGGATAACTGTAGAGAAGATCTGTCAAGTGCTAAAGATTATCATCGCCGCCATAAAGTTTGTGAGCTTCATAGCAAAGCCTCTAAAGCTCTTCTATCTAATCAATTGCAAAGGTTTTGCCAACAGTGTAGCAGATTTCACCCTCTGTCGGAGTTTGATGAAGGGAAGCGGAGTTGTAGGCGAAGACTTGCTGGGCATAATCGTCGGAGAAGAAAAACACAACAGGAAGATGTTACGTCACAGCCAGAGAATGTGACTACAGGCAATATGGAAATTTGTAGCTTGTTGACTGCAATAGCTCGTTCGCAAGGGAAATTTGAGGAAATAAGTAAGATTGGCTCACAAGTTCCACAAGATAAAGATCATCTTTTTCAGATTCTTAATAGGTTGGCTTTGCCAGCTGATCTGGCCTTGAAGTTGCTCAATGTTGGTAATTTCAATGGCAATGTGCAAACTTCATCCTATGATCATGACAAACTGAACCAGAGCACCGCCCCATTAACTAAGGACCTACTTGCTGGTCTTTCGACTGCTCTGTCGACATCTGTTCCGGATGCAACTGCATCACTATCTCAAAATTGCAGTCAGAGTAGTGGCAGCGAGAAATCTAGGACTAGTGCTGAACAAATTGTTGGAGCAAATTTACAAACAAGAAGGCCAACACTAGAATTCACTTCAGTTGGAGGAGAAAGAAGTAGTGGTAGTTCCCAGTCACCTGTTGAAGATTCGGATTGCCCAGAAGTTCGAGTGAATTTACCGTTGCAACTATTTAGCTGCTCTCCAGAAAATGAATGCCTTCCAAAAATGGTATCATCACAAAAGTATTTTTCATCTGATAGCAGTAACCCTGTGGAAGAGAGGTCACTATCATCTTCTCCTCCTGTTATGGAGAAGCAGTTTAATTTGCAGGGTGTGACAAGAGGTCTCAACCCTGAGAGCTTTTCAATTAGAAGAGAAATCAATGCAAACAAGGAAGCTAGGCAAAATCTTAGTTGTAATATCTCTCTTCACCTTTCCAATGGGTCAAATAGCAGAATCCAACCTGGTTCACTTCAAAGTGTACCATTTCAACCTGGGTATGCATCTTCGGGCTCTGACCATTCACCTCCTAGTTTGAATTCAGATGCTCAGGATCGAACTGGGAGAATAATGTTTAAACTATTTGACAAGGATCCTAGCCATTTCCCAGGAACACTGCGAACACAGATTTACAACTGGCTTTCTAGTAGGCCGTCAGACTTGGAGAGCCACATAAGGCCTGGCTGTGTGGTCTTATCAGTTTATGCTACAATGTCCTCTGCTGCCTGGGAGCAACTAGAAGAAAACTTCCTTCAACGTGTTCATTCTTTACTTCAAAATTCAAATTCTGATTTTTGGAGGAATGGAAGGTTTCTGGTTCATTCTGGCAGTCGGTTAGCGTCGCATAAAGATGGAAATATTCGCTTATGCAAACCATGGAGAACATGGAGGTCTCCAGAGGTGATATCAGTGTCCCCTTTGGCAATTGTTAGTGGTCAAGAAACCTGTATTTCATTGAAGGGTAGAAATCTGTCAACTCCAGGCACCAAGATTCATTGTACAGGTACTGGCCGTTATACATCGGAGGAAGTTATAGGATCTGCATATCATGGTAATACATATGATAAGATAAAACTAAGTGGTTTTAAAGTTCAGAATGCATCTGGTGTTCTGGGTCGCTGTTTCATTGAGGTTGAAAATGGTTTCAAGGGTGACAGCTTTCCAGTGATAATAGCTAATTCAACCATTTGTAAGGAATTGAGACCGCTCGAGTCTGAATTTGATTCGGAGGAAGTATGCGATGCCATTTCTGATGAGCATGAAAATGATTATGGAAGGCCCAGATCTAGGGAAGAAGCTTTGCACTTCTTGAATGAGCTTGGCTGGCTGTTCCAGAGAGAAAGGTTTCAGAATGTGCATGAGGTGCAAGATTATTCACTGGATAGGTTCAAGTTTGTACTCACCTTTGCTGTGGAAAGGAACTGTTGTATGTTAGTCAAAACCCTTCTGGATTTGCTGGTTGATAAACACTTAGAAGGGGAATCATTGTCAGCGAGTTCAGTGAATATGCTTAATGCAATTCAACTGTTAAATAGAGCAGTGAAAAGAAAATACAGAAACATGGTTGATTTGCTCATCTGTTATTCGATACCTCTAAAAAATGAGACATCAAGGAGATTTGTATTTCCTCCTAATGTCGGGGGCCAAGATGGAATTACACCTTTGCACTTGGCAGCATGCACATCAAATTCTGAGGGCGTAATTGACTCTTTAACCAATGATCCACAGGAGATTGGGTTGAAGTGCTGGGAATCCCTAGTGGATGTAAATGGGCAGACTCCACATGCCTATGCCATGATAAGGAATAATCACTTTTATAATGTGCTGGTTGCTCGCAAGCATGCTGATAAACAAAGAGGTCAAGTTTCATTAACAATGGACAATGAGATAGGACAATCATCACTGAGAATTGAGCTCAGGCAAAAGCAAGGTAACAAAGTGAAGCGAGGCCAAAATTCTTGTGTGAAGTGTGTGATGGCAGAAAGTCATTCCTACAGGAAAGTTCCCGCTTCACGGGGCTTTATCCAGCGTCCTTTTATCCATTCAATGCTAGCTGTTGCCGCTGTATGTGTATGTGTATGTCTGTTCATGCGCGGAGCCCCTTCCATAGGCTCAGTTGCTCCCTTCAGGTGGGAAAAAATGGATTATGGCACACATTAG 3084 0.4228 MEKLAPPIFIHKTKLPTSYHDSSSSMTINNTKKRDLSHDLFQNQTTNENWNPKAWSWDSVNFLSKPLTQNKEVDDETVLELNLGRGEPDPTVVRPNKKVRSGSPSSATTSYPTCQVDNCREDLSSAKDYHRRHKVCELHSKASKALLSNQLQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQQEDVTSQPENVTTGNMEICSLLTAIARSQGKFEEISKIGSQVPQDKDHLFQILNRLALPADLALKLLNVGNFNGNVQTSSYDHDKLNQSTAPLTKDLLAGLSTALSTSVPDATASLSQNCSQSSGSEKSRTSAEQIVGANLQTRRPTLEFTSVGGERSSGSSQSPVEDSDCPEVRVNLPLQLFSCSPENECLPKMVSSQKYFSSDSSNPVEERSLSSSPPVMEKQFNLQGVTRGLNPESFSIRREINANKEARQNLSCNISLHLSNGSNSRIQPGSLQSVPFQPGYASSGSDHSPPSLNSDAQDRTGRIMFKLFDKDPSHFPGTLRTQIYNWLSSRPSDLESHIRPGCVVLSVYATMSSAAWEQLEENFLQRVHSLLQNSNSDFWRNGRFLVHSGSRLASHKDGNIRLCKPWRTWRSPEVISVSPLAIVSGQETCISLKGRNLSTPGTKIHCTGTGRYTSEEVIGSAYHGNTYDKIKLSGFKVQNASGVLGRCFIEVENGFKGDSFPVIIANSTICKELRPLESEFDSEEVCDAISDEHENDYGRPRSREEALHFLNELGWLFQRERFQNVHEVQDYSLDRFKFVLTFAVERNCCMLVKTLLDLLVDKHLEGESLSASSVNMLNAIQLLNRAVKRKYRNMVDLLICYSIPLKNETSRRFVFPPNVGGQDGITPLHLAACTSNSEGVIDSLTNDPQEIGLKCWESLVDVNGQTPHAYAMIRNNHFYNVLVARKHADKQRGQVSLTMDNEIGQSSLRIELRQKQGNKVKRGQNSCVKCVMAESHSYRKVPASRGFIQRPFIHSMLAVAAVCVCVCLFMRGAPSIGSVAPFRWEKMDYGTH* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1155 1027 MobiDBLite consensus disorder prediction 303 357 - -
Lan11g1155 1027 Pfam SBP domain 114 187 IPR004333 GO:0003677
Lan11g1155 1027 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 34 1026 IPR044817 GO:0003677
Lan11g1155 1027 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 14 34 1026 - -
Lan11g1155 1027 MobiDBLite consensus disorder prediction 389 410 - -
Lan11g1155 1027 MobiDBLite consensus disorder prediction 83 111 - -
Lan11g1155 1027 Gene3D - 105 175 IPR036893 GO:0003677|GO:0005634
Lan11g1155 1027 SUPERFAMILY Ankyrin repeat 774 924 IPR036770 -
Lan11g1155 1027 MobiDBLite consensus disorder prediction 462 491 - -
Lan11g1155 1027 SUPERFAMILY SBT domain 112 192 IPR036893 GO:0003677|GO:0005634
Lan11g1155 1027 Gene3D - 762 964 IPR036770 -
Lan11g1155 1027 MobiDBLite consensus disorder prediction 178 199 - -
Lan11g1155 1027 ProSiteProfiles Ankyrin repeat profile. 858 879 IPR002110 GO:0005515
Lan11g1155 1027 ProSiteProfiles Zinc finger SBP-type profile. 111 188 IPR004333 GO:0003677
Lan11g1155 1027 MobiDBLite consensus disorder prediction 303 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1155 Lan-Chr11 16134060 16139862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1155 3 1026 SBP-box Gene Family AT1G20980 50.889 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lan11g1155 SBP 1.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1155 - - lang:109360589 2021.9