Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1151 ATGGCTGGTTATGGAAGGGAAGGTATGGTGAGGCAGTATGTAAGATCGAAGGTCCCTCGTTTAAGATGGACTCCAGAACTTCATCGTTGCTTTGTTTATGCCATTCAGATTCTTGGAGGTCATCATAAGGCTACCCCAAAGCTTGTTCTTCAGTTGATGGATGTTAAAGGTCTCACAATTTCACACGTCAAGAGCCATCTGCAGATGCATAGAAGCATGAGAGGTGACTCATGCAGACAAGATAGGATTTCCTCCCAACATAGAAAACAATCTTTGCTAGAGCATGATGATGATGATAGGTGGGTTGATGAAGTGAATGATGTTGGTGTTAACTCTTGTTTTAAAAGAGCTAGAACAGAGCCAAATCAGCACACTTTTTATGATTATCTGAGGGTCAAGGTTGAGCAGAGGGGAATAAGAGAGATTTTTGGTGATTCTGTAAGGAAATCCCACACTACAGCATGTCCTGTGAAACCATATTGTGATGACAACCTCAATTCATTCAAATGTACAAAGCAAGGATCTGAATTACTCCAGGTTACCAAGTTAAATGATAGGAATCCCTTGAATGTACATGGGAACATTAAGAGGGTTCATGCAGAAGATGATGATGTTGAAGGTCACAAGCTCTCATTATCAATGTCATTGCCCCAACCTTCCTCTCAGAGAAGTAATGTTTCTTCAGGCAGTGAGATCAGTGAGGCAATTATTTCATCATGCCCTGGGTCTAGCAACTACAAGGGATGCTTTAATTCATCAACTATCCAAAATATAATTAATTTAGACCTATCTCTGGCCATATGTGGCAACTGA 813 0.4071 MAGYGREGMVRQYVRSKVPRLRWTPELHRCFVYAIQILGGHHKATPKLVLQLMDVKGLTISHVKSHLQMHRSMRGDSCRQDRISSQHRKQSLLEHDDDDRWVDEVNDVGVNSCFKRARTEPNQHTFYDYLRVKVEQRGIREIFGDSVRKSHTTACPVKPYCDDNLNSFKCTKQGSELLQVTKLNDRNPLNVHGNIKRVHAEDDDVEGHKLSLSMSLPQPSSQRSNVSSGSEISEAIISSCPGSSNYKGCFNSSTIQNIINLDLSLAICGN* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1151 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 162 270 IPR044848 GO:0003700
Lan11g1151 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 4 161 IPR044848 GO:0003700
Lan11g1151 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Lan11g1151 270 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Lan11g1151 270 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 4 161 - -
Lan11g1151 270 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 162 270 - -
Lan11g1151 270 Gene3D - 18 74 - -
Lan11g1151 270 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1151 Lan-Chr11 16033072 16036381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1151 5 74 G2-like Transcription Factor Family AT1G14600 75.714 4.09e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan11g1151 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1151 - - lang:109360173 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1151 11 16033072 16036381 Lan11g1151 11 16033072 16036381 ECH