Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1148 ATGGATTCACTCTTCTCTTCTCAAAACCCTACTAACCCCACTTTCCTTCCACCACCGCCCGGAATCCCTTTCCCCGCCGCAACAACCACCGTCACCGCACCCAATGGTATAACCACCACCCCCAAAACCCCTACACCGATTCTGATACCAAAGCCTGAACCTTTTGAGGGATGGGTTGAGACCCAAAACACCAAAGAGTCTCAACAACAAACCACTTTTTCAAATGGGCCCCACACTCTTCTCAACCTATTTGGCGATGAAACCCTAGCTTCTGCTTCTTCAGATAAAAACGACACCGTTTCGAACTTCAACCAAATTTCTGAGGTTTTCAGGACTGCATTCTCAAAGGGTTTGCAGCAATTTCAAGTCCCTAAAGAAGAACACGACACCATTTTGGACCATGAGTCCGGTGCAATTGTTCCCGTGCCACCGCCGGAGAATAATAGTAATAACAGTAACAAGGACTCTCCAGGGGCAGTGGCACTATCGACGCCACGAAGTAGAGTGAAGGAACTTGTGAGGGTCACTGATTTCGGGGGGATCAAGGAGCAGCGGCATTTTCGCGATGTAGTGAGGAAGACTAGGATGATCTATGATTCATTGCGGGTGTTATCGACAGTGGATGAAGAGAGGAGGGTAGAAATTGATCATAGGAGGGTGAGAGCAGACTTAAGAGCTTCTAATTTGATGAGGAATTGCGGGTTGTGGCTTAATCGCGATAAGAGGATCGTTGGTGCTATTCCGGGTGTTTGCATTGGTGATGTGTTCCTTTATAGGATGGAGTTATGTGTGGTTGGGTTACATGGTCAACCACAAGCTGGGATTGATTATCTTCCGGCTAGTTTTAGTGCCAATGGTGAACCAATAGCTACTAGTGTTATAGCTTCCGGTGGATATGAGGATGATCTTGATGAAGGCGATGTTATCATATATTCGGGTCATGGAGGCCAAGACAAGCATTCTAAGCAAGTTTTTCATCAGAAGTTGGAAGGAGGGAACCTTGCAATGGAGAGAAGTATGCAATATGGGATTGAAGTGAGGGTTATTCGTGGGGTTCGGTGTGAAGGAACTGCATCGGCTTCGGGTAAGTTGTATGTTTATGATGGGCTGTATAAAATTGTTCAGTGCTGGTTTGATGTTGGGAAGTCTGGTTTTGGTGTTTTTAAGTATAAATTGTGTAGAATTGATGGGCAACCTAAGATGGGTAGCTCAGTGCTGAAAGAAGCTAATAAGCTTAGGAAAGATCCATTGAGTTTTAAACCTATGTGTTGCCTTTCTCTTGATATTTCGATCAAGAAGGAGTATGTCCCGGTTCGTCTTTTTAATGACATAGATCAAAACAATGACCCTCTCTATTTTGAGTATCTGATGAGAACTACTTTTCCAGACTTTGTGTTTCATCAAAGTGGAAGAGCTACAGGTTGTGAGTGTGTGGGCGGTTGTGTTGATGGTTGTTTTTGTGCTATGAAAAATGGAGGTGAATTTTCGTATAATCAAAATGGGGTTCTCTTGAGAGGGAAGCCTGTAATTTTTGAATGTGGCCCTTTTTGCCGCTGTCCTCCTCATTGTCGGAATCGTGTTACACAGAAGGGGCTGAAACATAAGTTGGAAGTATTTAGGTCTAGGGAAACTGGTTGGGGAGTTAGGTCTTTGGACCTTATTCAAGCCGGTGCTTTTATCTGTGAGTACACAGGGGTTGTGCTGACTAAGGAGCAAGCCGAAATTTTGTCGATGAATGGCGATTCGTTGATATATCCGAATCGGTTTTCTAATAGGTGGACGGAGTGGGGGGACTTATCTCTGATAGACTCCAATTACGTGCGTCCATCATATCCATCAATTCCTCCTTTAGATTTTGCCTTGGATGTGTCAAGAATGAGGAATGCTGCTTGCTATATGAGTCATAGTTCGACTCCAAATGTGTTGGTTCAGTTCGTTCTCTATGATCACAATAATTTGATGTTCCCCCACCTAATGTTATTTGCAATGGAGAGCATCCCACCAATGAGAGAGCTCAGCCTTGATTATGGGGTAGCCGATGAGGGGACGGGGAAGCTCTCTATCTGTAACTGA 2073 0.4457 MDSLFSSQNPTNPTFLPPPPGIPFPAATTTVTAPNGITTTPKTPTPILIPKPEPFEGWVETQNTKESQQQTTFSNGPHTLLNLFGDETLASASSDKNDTVSNFNQISEVFRTAFSKGLQQFQVPKEEHDTILDHESGAIVPVPPPENNSNNSNKDSPGAVALSTPRSRVKELVRVTDFGGIKEQRHFRDVVRKTRMIYDSLRVLSTVDEERRVEIDHRRVRADLRASNLMRNCGLWLNRDKRIVGAIPGVCIGDVFLYRMELCVVGLHGQPQAGIDYLPASFSANGEPIATSVIASGGYEDDLDEGDVIIYSGHGGQDKHSKQVFHQKLEGGNLAMERSMQYGIEVRVIRGVRCEGTASASGKLYVYDGLYKIVQCWFDVGKSGFGVFKYKLCRIDGQPKMGSSVLKEANKLRKDPLSFKPMCCLSLDISIKKEYVPVRLFNDIDQNNDPLYFEYLMRTTFPDFVFHQSGRATGCECVGGCVDGCFCAMKNGGEFSYNQNGVLLRGKPVIFECGPFCRCPPHCRNRVTQKGLKHKLEVFRSRETGWGVRSLDLIQAGAFICEYTGVVLTKEQAEILSMNGDSLIYPNRFSNRWTEWGDLSLIDSNYVRPSYPSIPPLDFALDVSRMRNAACYMSHSSTPNVLVQFVLYDHNNLMFPHLMLFAMESIPPMRELSLDYGVADEGTGKLSICN* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1148 690 Pfam Pre-SET motif 430 526 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan11g1148 690 MobiDBLite consensus disorder prediction 28 44 - -
Lan11g1148 690 ProSiteProfiles Pre-SET domain profile. 473 531 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan11g1148 690 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 44 687 - -
Lan11g1148 690 SMART G9a_1 240 398 IPR003105 -
Lan11g1148 690 Pfam SAD/SRA domain 244 398 IPR003105 -
Lan11g1148 690 SMART preset_2 426 518 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan11g1148 690 SMART set_7 534 683 IPR001214 GO:0005515
Lan11g1148 690 Gene3D - 242 402 IPR036987 -
Lan11g1148 690 ProSiteProfiles SET domain profile. 534 677 IPR001214 GO:0005515
Lan11g1148 690 MobiDBLite consensus disorder prediction 1 45 - -
Lan11g1148 690 Pfam SET domain 545 677 IPR001214 GO:0005515
Lan11g1148 690 ProSiteProfiles YDG domain profile. 245 394 IPR003105 -
Lan11g1148 690 MobiDBLite consensus disorder prediction 136 163 - -
Lan11g1148 690 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 114 690 IPR025794 GO:0016571
Lan11g1148 690 SUPERFAMILY PUA domain-like 226 408 IPR015947 -
Lan11g1148 690 MobiDBLite consensus disorder prediction 143 160 - -
Lan11g1148 690 Gene3D SET domain 403 690 IPR046341 -
Lan11g1148 690 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 44 687 - -
Lan11g1148 690 SUPERFAMILY SET domain 419 679 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1148 Lan-Chr11 15895488 15901071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1148 188 679 Su(var)3-9 homologs AT5G04940 39.516 4.86e-107 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan11g1148 SAD_SRA 6e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1148 K11420 - gmx:100795514 976.081