Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1147 ATGGAATCCCGTTGCAATAGTTTCTATAAAATAATTCCAAGAAAATGTCTTGAAGATCTTGATGATGGAAATCTTATGATTCCGAACAATTTCACAAGGAGATTTGGTGGTGTTCTTCCAAACCCATTATTTTTTAAGCCTCCAGATGGCACTGAATGGAAGGTATATTGGATTGAAAATGATGGTAAGATTTGGTTTCAAAAGGGTTGGAAAGATTTTGCTACATATTATTCTCTGGATTATGGGCATTTGGTGGTGTTTGAATATCAAGAATCTTCTCATTTTGAGGTACACATATTTGACATGAGTGCCCTTGAAGTAGAATATCCTTTTCATAACCAGATTAGTAATGTTGAGTCAGATGAAAATTTGAATGAAGAATCTCCACTGAAGAAGAAAAGAATGAAGGCACCTATGTTATCTCGTCATTTGCATAAGACAGAAGTTAATGCTAGCCCCAATTTGAAGAACTTACTTCAGAATGCCCAAAGTAAAGATGGGAAGTCAACTCAATGTACTTCACTGTTGATTAGTCCCCATCCTAGGACAAACGGAAATTTGGTAGAAGCTAAGAAGTTTGTATCAGAAAATCCGTTTGTGACGATCAATATAACGCCGAGTTACCTTGATGGAAACCATCCAAGTTTGTCATCTGTCTTTGCCAGAAGGTATTTTAAAAAGAGGATGCAGAATGTGATGATAAAGTTTGGAAATAAGTTTTGGCATTTAAAGGTGTTCTGCTATTTGTCAAAAGGGTCAGCCTCATTCGGCAATGGTTGGACCCTTTTTGCTAAAGAAAACAAATTGGAAGTTGGAGATGTTTGTGTCTTTGAGCTCATTAATATAGAAGATAAAGTGTTTGATCTTCATATTTTTAGAGGCCACAATTATGCAATCCCTTAG 903 0.3588 MESRCNSFYKIIPRKCLEDLDDGNLMIPNNFTRRFGGVLPNPLFFKPPDGTEWKVYWIENDGKIWFQKGWKDFATYYSLDYGHLVVFEYQESSHFEVHIFDMSALEVEYPFHNQISNVESDENLNEESPLKKKRMKAPMLSRHLHKTEVNASPNLKNLLQNAQSKDGKSTQCTSLLISPHPRTNGNLVEAKKFVSENPFVTINITPSYLDGNHPSLSSVFARRYFKKRMQNVMIKFGNKFWHLKVFCYLSKGSASFGNGWTLFAKENKLEVGDVCVFELINIEDKVFDLHIFRGHNYAIP* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1147 300 SMART B3_2 8 103 IPR003340 GO:0003677
Lan11g1147 300 SMART B3_2 199 295 IPR003340 GO:0003677
Lan11g1147 300 SUPERFAMILY DNA-binding pseudobarrel domain 195 294 IPR015300 -
Lan11g1147 300 PANTHER B3 DOMAIN-CONTAINING 3 293 - -
Lan11g1147 300 CDD B3_DNA 25 101 IPR003340 GO:0003677
Lan11g1147 300 ProSiteProfiles B3 DNA-binding domain profile. 10 103 IPR003340 GO:0003677
Lan11g1147 300 Gene3D - 182 298 IPR015300 -
Lan11g1147 300 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 3 293 - -
Lan11g1147 300 Gene3D - 2 104 IPR015300 -
Lan11g1147 300 CDD B3_DNA 198 293 IPR003340 GO:0003677
Lan11g1147 300 Pfam B3 DNA binding domain 199 293 IPR003340 GO:0003677
Lan11g1147 300 Pfam B3 DNA binding domain 21 101 IPR003340 GO:0003677
Lan11g1147 300 ProSiteProfiles B3 DNA-binding domain profile. 199 295 IPR003340 GO:0003677
Lan11g1147 300 SUPERFAMILY DNA-binding pseudobarrel domain 3 103 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1147 Lan-Chr11 15878570 15881187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1147 20 293 B3 DNA Binding Superfamily AT3G18990 28.000 9.37e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lan11g1147 B3 1.3e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1147 - - lang:109359485 632.098