Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1146 ATGAGATACAAAACAATTCTCAACTCTTCACCTTCAACATCTATGACTTCCAGTTGCAATCTTTTCTATAAAATTATTCCCAGAAAATATATTGAAGATGGAAATCTTAAGATCCCAAGCAAATTCACAAGGAAATATGGTGTTGGTCTATCAAACCCAGTGCTTCTCAAGCCTCCAGATGGCACAGAATGGAAAGTATATTGGACCAAACATGTTGGTGATATTTGGTTTCAAAAGGGTTGGAAAGAATTTGCTGCATATTACTCAATAGATTATGGGCATTTGCTGTTGTTTAAATATGAGGAAACTTCTCATTTCAATGTACACATATTTGACATGAGTACCCTTGAAATAAACTATCCTTTCCATGGCACTCAAGATGAAAAGAACAACCTTGAACAGATTATTGATGATTCTGTTGAAATCTTGGATGAACTAGCACCATGCCGAAAATCACCAATGTCATGTCCTCAACCATATAAGAAACTTAGAACTGACAGAAGAGATGTTGAAAGAAGCTCCAATTTAGAAAAATTGCACCTGAGTGTTGAAACTAAAGGTAGTCACTCTCAGAGGACAAACTTTGAGAAATCACCATTTGCATATGCTGGTAAAGAACCAAATTGTCCTCCATCACAAGGAGATGGTGTCAATTGCTTGGAACATGAGAGAATTCCAGTTGCAGAAAGTAAGGTTAATGTTACCAGGAAAGGTGAGAAGGAAACTCAAAAAACTTCACTTCCTATTAGTCCCCAAACACACATAACTGGAGCTCTGAAAGATGCTAAGAAATTCACCTCACAAAATCCCTTTTTCATGGTAGATATAGTGCAAGGTTATTTGGGACAGAACAGACCGGTTTTGATCCCATGGTGGTTAAAATATAATTTGATGCAGTGTGTACCAGTTGATTTCACCAGAAAGTACTTCAATAAGAAGAAGCAGAATGTGACATTACAGCTTGGAAATAAATTTTGGCCTCTAAAGTTGTTGTGTTATCCATATAATACTCCAAGCAAGTTGTCTAGTGGTTGGTCCCTATTTGTAGAAGAAAGTAAATTGCAAGTTAGAGATATTTGTATTTTTGAGCTAATAAATAGAGAAGATGCAATCTTTGATGTTCATATTTTCAGAGGTGGCTCATATCCATAA 1152 0.3602 MRYKTILNSSPSTSMTSSCNLFYKIIPRKYIEDGNLKIPSKFTRKYGVGLSNPVLLKPPDGTEWKVYWTKHVGDIWFQKGWKEFAAYYSIDYGHLLLFKYEETSHFNVHIFDMSTLEINYPFHGTQDEKNNLEQIIDDSVEILDELAPCRKSPMSCPQPYKKLRTDRRDVERSSNLEKLHLSVETKGSHSQRTNFEKSPFAYAGKEPNCPPSQGDGVNCLEHERIPVAESKVNVTRKGEKETQKTSLPISPQTHITGALKDAKKFTSQNPFFMVDIVQGYLGQNRPVLIPWWLKYNLMQCVPVDFTRKYFNKKKQNVTLQLGNKFWPLKLLCYPYNTPSKLSSGWSLFVEESKLQVRDICIFELINREDAIFDVHIFRGGSYP* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1146 383 MobiDBLite consensus disorder prediction 157 176 - -
Lan11g1146 383 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 15 378 - -
Lan11g1146 383 SUPERFAMILY DNA-binding pseudobarrel domain 297 378 IPR015300 -
Lan11g1146 383 Gene3D - 15 115 IPR015300 -
Lan11g1146 383 Pfam B3 DNA binding domain 26 112 IPR003340 GO:0003677
Lan11g1146 383 Pfam B3 DNA binding domain 300 379 IPR003340 GO:0003677
Lan11g1146 383 CDD B3_DNA 36 112 IPR003340 GO:0003677
Lan11g1146 383 PANTHER B3 DOMAIN-CONTAINING 15 378 - -
Lan11g1146 383 MobiDBLite consensus disorder prediction 161 176 - -
Lan11g1146 383 SUPERFAMILY DNA-binding pseudobarrel domain 16 114 IPR015300 -
Lan11g1146 383 CDD B3_DNA 301 378 IPR003340 GO:0003677
Lan11g1146 383 ProSiteProfiles B3 DNA-binding domain profile. 301 380 IPR003340 GO:0003677
Lan11g1146 383 Gene3D - 252 380 IPR015300 -
Lan11g1146 383 ProSiteProfiles B3 DNA-binding domain profile. 21 114 IPR003340 GO:0003677
Lan11g1146 383 SMART B3_2 22 114 IPR003340 GO:0003677
Lan11g1146 383 SMART B3_2 284 380 IPR003340 GO:0003677
Lan11g1146 383 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1146 Lan-Chr11 15871634 15876655 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1146 21 378 B3 DNA Binding Superfamily AT3G18990 30.055 5.59e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lan11g1146 B3 8.8e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1146 - - lang:109359484 795.423