Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1144 ATGATTAATGGCAATAGTTGCTCTAAATCTGAAGCTAATGCAATACAGAAGAAGTTAGTAATGGATAAAGCGAGAGATTATATAAATAAAACTAAGAACCCTGCGTTTATTCAACAATTGTTCCCAACTTATGTGGATGCCAAGAGAGATGTTTTGGGGATAAATAAAGATTTTGCAAGAGAATACCTAAAAGGGTTCGAAGGGAAAGCGACAATTGGGGTTCTTCATGAGAAAAAGACATGGCCTGTTAGGATCAATATTAATCATTGCGCTGGCCAAACTATCATGATTGGTGGCTGGAAATCATTTTGGCAGCATTACAAGTTACAAGTTAATGATGTTTGTGTCTTTGAGATGACTCAACACACACCACTTTCATTCCAAGTTATTATCTTTCCAGCCAGAGAACAACATAAGGATTTCCAAGAACATACTAATAGATTTGTTCAAGAGATATCCTAA 462 0.3571 MINGNSCSKSEANAIQKKLVMDKARDYINKTKNPAFIQQLFPTYVDAKRDVLGINKDFAREYLKGFEGKATIGVLHEKKTWPVRININHCAGQTIMIGGWKSFWQHYKLQVNDVCVFEMTQHTPLSFQVIIFPAREQHKDFQEHTNRFVQEIS* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1144 153 SMART B3_2 36 135 IPR003340 GO:0003677
Lan11g1144 153 Pfam B3 DNA binding domain 36 133 IPR003340 GO:0003677
Lan11g1144 153 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 12 134 - -
Lan11g1144 153 SUPERFAMILY DNA-binding pseudobarrel domain 31 137 IPR015300 -
Lan11g1144 153 Gene3D - 13 138 IPR015300 -
Lan11g1144 153 PANTHER B3 DOMAIN-CONTAINING 12 134 - -
Lan11g1144 153 CDD B3_DNA 34 133 IPR003340 GO:0003677
Lan11g1144 153 ProSiteProfiles B3 DNA-binding domain profile. 37 135 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1144 Lan-Chr11 15778804 15783716 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1144 49 125 REM Transcription Factor Family AT4G31650 35.443 1.22e-08 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lan11g1144 B3 1.9e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1144 - - lang:109360177 320.857