Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1143 ATGGTGTCTTGTCGTGGTTGTAGGAGTGATGCTAAATCTATGGGCTTCCTTAAGATACTTCCAAAGGACCACTTGCAAGGAGAAGAGTTTATGGTAATTCCTAGCAATTTTGAGATGGAAAACAAGGTAATACTACCAAACCCATTATTCCTTAGACTTTCTAATGGTGCTGAATGGAGTGTGTCTTGGATAAAACGTGGTTATGATATTTGGTTTCAACAAGATTGGAAAAAATTTGTAATGGATTGTTCACTGAAGGATCCCCATTTTATAGTTTTCAAATATGAAGGAGGATCTCATTTTGAGGTTAGAATATTTGAAGTTACTACTTATAATGAGATTGAATATTCAAGTATAAGATGCACAAATGATGCTACCAAAAATCATTATATTGAAGTTGAAAGTGATAACTCTGTTGAGATTATTGAAAGTGATGATGACTCTGATGAGATTGTTGAGAATGAAATACATACATTGCTTCCTAAGAAAAGGAAAAACAATACCAAAGGTGAACATAGAAGTAGCATCAATGTAAACTTTAGATCTAAAGGTGTTCTATCTCCAAGGAAGCTTAACAAAACAAAAAACAATGTGGATTTTGATGCTACTCAGAAAAAAGTGTCATCAGGTTCATTATCTTCTGCATCTTATTTATTTGTTATTGTTTTTATGTAA 675 0.3259 MVSCRGCRSDAKSMGFLKILPKDHLQGEEFMVIPSNFEMENKVILPNPLFLRLSNGAEWSVSWIKRGYDIWFQQDWKKFVMDCSLKDPHFIVFKYEGGSHFEVRIFEVTTYNEIEYSSIRCTNDATKNHYIEVESDNSVEIIESDDDSDEIVENEIHTLLPKKRKNNTKGEHRSSINVNFRSKGVLSPRKLNKTKNNVDFDATQKKVSSGSLSSASYLFVIVFM* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1143 224 Gene3D - 7 110 IPR015300 -
Lan11g1143 224 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 9 206 - -
Lan11g1143 224 SUPERFAMILY DNA-binding pseudobarrel domain 12 108 IPR015300 -
Lan11g1143 224 Pfam B3 DNA binding domain 16 107 IPR003340 GO:0003677
Lan11g1143 224 CDD B3_DNA 16 106 IPR003340 GO:0003677
Lan11g1143 224 ProSiteProfiles B3 DNA-binding domain profile. 16 109 IPR003340 GO:0003677
Lan11g1143 224 PANTHER B3 DOMAIN-CONTAINING 9 206 - -
Lan11g1143 224 SMART B3_2 16 109 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1143 Lan-Chr11 15777658 15778895 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1143 28 199 B3 DNA Binding Superfamily AT3G18990 27.624 8.22e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lan11g1143 B3 2.2e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1143 - - lang:109359759 418.313