Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1135 ATGTCAGAATCAAATGCAGTAGCAAATGGTTTAGCTGGTGCAGGTGGTGGTATTATTGCTCAAATACTAACTTATCCTCTTCAAACAGTAAACACACGCCAACAAACGGAGAGAACACTCAAGAGGAACAATAACCAAAGTTTGCAACTTCAATCTTCTTCTAACACAACTACCACTGTTCCTGCTCCTGGCACTTTTCATCAGATTCTTCATGTCATTGGAAGTGAGGGTTGGGGTGGACTATATAGTGGTCTTAAGCCTTCTCTTCTTGGAACTGCTGTTTCTCAGGGCATTTACTACTACTTCTATCAAGTTTTTAAGAACAGGGCAGTGGCCATTGCAGCCGCCCGGAAAATCAAAGGGCGAGGGGATGGCACTGTTGGAATGTTTGGTTGGCTCATTGTGGCTGCTATGGCTGGGTCCTTGAATGTATTGCTAACAAATCCAATATGGGTTCTGGTGACTCGAATGCAGACACATACTCAAGCAGAAAGAAAAATCATAGAGGAAAAGAAAGAAGCTCTTAGAAGGGAAGCTTCTGAAAGTAGCATAGCAGGCTCAACATTACAAGACAAAGTGGCAGAATTGGAGTCTATAAAATCTCAACCATTTGGAACTATACATGCAGCTAACGAAGTCTATAATGAAGCGGGTGTTGTCGGATTTTGGAAGGGTGTCATCCCTGCTCTTATTATGGTATGCAACCCGTCAATCCAGTTTATGATTTATGAGAGCTCATTAAAGCACCTAAGGGCAAAACGAACCGCTAAGAAGCAGGGGAATCAAAGTGTTACGGCTTTGGAGGTCTTTTTGCTGGGAGCATTGGCAAAACTTGGAGCAACTGTATCAACATACCCCTTACTTGTTGTGAAATCAAGGCTTCAAGCAAAACAGGAAATTGGTGGAAGTAACTCATATAGATACTCAGGTACCGTTGACGCGATACTTAAAATGATCCGTTACGAAGGATTGCCTGGCTTTTATAAAGGAATGAGCACAAAGATAGTACAGAGTGTTTTTGCAGCTTCTGTTCTATTTATGGTTAAGGAGGAGCTTGTTAAGTTTTTCACTGTTTTAACAGACAAGAGCAAAAAAGCTCTATTGAAAACAAAGTGA 1116 0.4158 MSESNAVANGLAGAGGGIIAQILTYPLQTVNTRQQTERTLKRNNNQSLQLQSSSNTTTTVPAPGTFHQILHVIGSEGWGGLYSGLKPSLLGTAVSQGIYYYFYQVFKNRAVAIAAARKIKGRGDGTVGMFGWLIVAAMAGSLNVLLTNPIWVLVTRMQTHTQAERKIIEEKKEALRREASESSIAGSTLQDKVAELESIKSQPFGTIHAANEVYNEAGVVGFWKGVIPALIMVCNPSIQFMIYESSLKHLRAKRTAKKQGNQSVTALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGGSNSYRYSGTVDAILKMIRYEGLPGFYKGMSTKIVQSVFAASVLFMVKEELVKFFTVLTDKSKKALLKTK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1135 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 264 355 IPR018108 -
Lan11g1135 371 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 4 366 - -
Lan11g1135 371 Coils Coil 158 178 - -
Lan11g1135 371 Pfam Mitochondrial carrier protein 4 108 IPR018108 -
Lan11g1135 371 Pfam Mitochondrial carrier protein 127 251 IPR018108 -
Lan11g1135 371 Pfam Mitochondrial carrier protein 263 356 IPR018108 -
Lan11g1135 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 109 IPR018108 -
Lan11g1135 371 SUPERFAMILY Mitochondrial carrier 5 351 IPR023395 -
Lan11g1135 371 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 366 IPR044712 GO:0006862|GO:0055085
Lan11g1135 371 Gene3D Mitochondrial carrier domain 1 181 IPR023395 -
Lan11g1135 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 249 IPR018108 -
Lan11g1135 371 Gene3D Mitochondrial carrier domain 182 369 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1135 Lan-Chr11 15608897 15613894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1135 71 356 Chloroplast and Mitochondria Gene Families AT1G25380 27.336 3.98e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1135 K13354 - gmx:100775304 575.859