Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1134 ATGAGCCCTCGAACAGTGAGAAGTTACCGTTTAAGGAATACAGCTATGGACCTTAACCGTCCTCCTCCCGTTACGATTGATTTAGATTCCCTTGATGATGTTGATGATGATGTTCTTTTATCTTCACCTACAACTTTTGCTCAGGCTAAGACCAATTCGAGGAGAAATCGTCGGAGGATTATAGTAGATGTGGATTTAGAAGACCGGACTGGCGTAACTAATAATATTAGCAATAGACGCAGAAGAGGTTCCGCAAACCAAACAATTATAAATTGTGATCATTATGTAAATTTGGAAGACAGTAGCAGTTCTACGAAGGAAAATGCTAGAAAGTCATCCGAAACTCCTAAGGATCCTGTCTTTAACTGCCCAATATGTATAGGACCTTTGATAGAACCAGTTTCAACAAAATGTGGTCATATTTTCTGCAACAAATGCATTAGAGCTGCAATAACTGTACAAGCTAAATGCCCTACCTGCAGAAAAAAAATTACTGTGAGAGAGCTCATAAGGGTGTTTCTTCCATCTACTAGTTGA 537 0.3911 MSPRTVRSYRLRNTAMDLNRPPPVTIDLDSLDDVDDDVLLSSPTTFAQAKTNSRRNRRRIIVDVDLEDRTGVTNNISNRRRRGSANQTIINCDHYVNLEDSSSSTKENARKSSETPKDPVFNCPICIGPLIEPVSTKCGHIFCNKCIRAAITVQAKCPTCRKKITVRELIRVFLPSTS* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1134 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 177 IPR013083 -
Lan11g1134 178 Pfam Zinc finger, C3HC4 type (RING finger) 122 160 - -
Lan11g1134 178 PANTHER RING ZINC FINGER-RELATED 25 178 - -
Lan11g1134 178 ProSitePatterns Zinc finger RING-type signature. 138 147 IPR017907 -
Lan11g1134 178 SUPERFAMILY RING/U-box 122 167 - -
Lan11g1134 178 PANTHER ELFLESS, ISOFORM B 25 178 - -
Lan11g1134 178 ProSiteProfiles Zinc finger RING-type profile. 123 161 IPR001841 -
Lan11g1134 178 SMART ring_2 123 160 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1134 Lan-Chr11 15592832 15597510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1134 5 177 C3H Transcription Factor Family AT5G48655 46.857 3.01e-45 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1134 K22651 - jre:109013825 197.978