Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1133 ATGGATGTGATTGAACATTATCTGCCTTGCCCTCAGGTGGTAGTTGATGTGGGATGTGGTACAGGAATCCTTTCTATATTTTGTGCTCAGGCTGGTGCGAAGCGGGTGTATGCCATTGATGCCAGTGACATTGCCCTGCAGGCCAATGAAGTTGTGAAAGAAAATAATCTGTCTGATGTTGTCATTGTATTACATGGACGAGTTGAGGATGTTGAAATTGACGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGAGCATGCTTGGAAGTGTTATTACGGCCAGAGATCGCTGGCTCAAACCTGGTGGTCTCATTCTTCCTTCAAACGCAACATTGTACATGGCCCCTGTAACACATACTGACAGATACAGTGAAAGCATCGACTTCTGGCGCAATGTTTATGGAATTAATATGTCTGCCTTGATACCATTAGCAAAACAGTCTTCATTTGAAGAACCTTCTGTGGAGACAATAAGTGGCGAAAATATTTTGACATGGCCACATGAGGTAAAGCATATTGATTCTTATTCTGTTTCCATCCATGAGCTAAAAACTGTAACATCAAAGTTTAAGTTCAGTTCAATGATGCGAGCACCACTACATGGTTTTGCATTTTGGTTTGATGTTGAATTTAACGGGCCTGCAATAGCACCAAGCAATTATCTTTCAACTTCAATTGTCGACAATCATATGGCGAATGGTAGTCAGAGAAAAAAGAGGACAAATCCTAATGAAGCGCTGGTCCTGTCCACTGCACCTGAGGACCCTCCAACACATTGGCAGCAGACGTTGATTTACTTATATGATCCAATAGCACTGGAGCAAGATCAGCTGATTGAAGGTTCAGTTACATTGTCACAAAGCAAAGAAAACGCTCGGTTTATGAACATTCACCTCGAATATTCCGTAGGTGGTCGAAACTACGTTAAAGAATCTGTTATGAAATGA 969 0.4138 MDVIEHYLPCPQVVVDVGCGTGILSIFCAQAGAKRVYAIDASDIALQANEVVKENNLSDVVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSNATLYMAPVTHTDRYSESIDFWRNVYGINMSALIPLAKQSSFEEPSVETISGENILTWPHEVKHIDSYSVSIHELKTVTSKFKFSSMMRAPLHGFAFWFDVEFNGPAIAPSNYLSTSIVDNHMANGSQRKKRTNPNEALVLSTAPEDPPTHWQQTLIYLYDPIALEQDQLIEGSVTLSQSKENARFMNIHLEYSVGGRNYVKESVMK* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1133 322 PANTHER BNAC03G41340D PROTEIN 12 319 - -
Lan11g1133 322 Gene3D Vaccinia Virus protein VP39 4 114 IPR029063 -
Lan11g1133 322 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 1 305 IPR025799 GO:0016274|GO:0018216
Lan11g1133 322 CDD AdoMet_MTases 14 113 - -
Lan11g1133 322 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 312 IPR029063 -
Lan11g1133 322 Pfam Ribosomal protein L11 methyltransferase (PrmA) 3 84 - -
Lan11g1133 322 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 12 319 IPR025799 GO:0016274|GO:0018216
Lan11g1133 322 Gene3D - 116 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1133 Lan-Chr11 15488664 15501831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1133 13 311 C2H2 Transcription Factor Family AT3G12270 35.873 6.14e-50 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1133 K11437 - gmx:100809174 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1133 11 15488664 15501831 Lan2g0153 2 1297177 1299417 LSH