Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1122 ATGTCTAACTCTGACGGAACAACTAACGCCGTCATCAACGACACAATCATCGACTCACCACAGCCCCATCCGCCACACCGAGACGGTGCTCTAGCCGTCAAGAAACCACCGTCCAAGGATCGTCACAGCAAAGTTGACGGTCGTGGACGGCGCATACGCATGCCTATCATATGTGCCGCACGTGTGTTCCAGCTCACACGTGAGCTCGGTCATAAGTCTGACGGCCAAACCATTGAGTGGCTACTCCGTCAGGCTGAACCTTCCATCATTGCCGCCACTGGAACGGGAACTACTCCGGCGAGCTTCTCCTCCGTATCTGTCTCCGTTCGCGGTGGTGGCAATTCTAACTCCCTCTCTTCTCCTTCTTCTAGTACCTCAGCTTCTCAACAACACAAGACGTTTCTCGCTCCAACTCCCTTCATTCTCGGGAAGAAAATACGGACTGATGAGGAGGACCCCACCAAGGACAACAACGGAGTTTCCGTGGGGTCCTTGGTGGGGCCTAATATGCCAGCTGGACTGTGGGCCTTTCCTGCCCGACCTGAATTCGGACAGGTCTGGAGCTTTGCTGCTGCGACACCAGAATTGATGTCGCAACAGCATAGTTCATTTTTAATTCAGCATCAGCAACAACATCAACAGCAACAACTAGCTATGGGAGAAGCTTCGGCGGCGCGGCTCGGAAATTACCTTCCGGGACATCTGAATTTGCTGGCTTCATTGTCAGGAGGGCACAACAATTCTGGCATGAGAGATGATGAATCTAATTGA 771 0.5266 MSNSDGTTNAVINDTIIDSPQPHPPHRDGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGGNSNSLSSPSSSTSASQQHKTFLAPTPFILGKKIRTDEEDPTKDNNGVSVGSLVGPNMPAGLWAFPARPEFGQVWSFAAATPELMSQQHSSFLIQHQQQHQQQQLAMGEASAARLGNYLPGHLNLLASLSGGHNNSGMRDDESN* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1122 256 ProSiteProfiles TCP domain profile. 38 92 IPR017887 -
Lan11g1122 256 MobiDBLite consensus disorder prediction 28 50 - -
Lan11g1122 256 MobiDBLite consensus disorder prediction 1 16 - -
Lan11g1122 256 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 253 IPR005333 GO:0003700
Lan11g1122 256 MobiDBLite consensus disorder prediction 93 131 - -
Lan11g1122 256 Pfam TCP family transcription factor 38 132 IPR017887 -
Lan11g1122 256 MobiDBLite consensus disorder prediction 1 50 - -
Lan11g1122 256 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1122 Lan-Chr11 15040822 15042226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1122 30 254 TCP Transcription Factor Family AT5G23280 65.652 6.15e-88 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan11g1122 TCP 3.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1122 K16221 - gmx:100799005 297.745