Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1115 ATGGCTGGTCAACTGAGTTTCGTAGTTGGATCTCATATTTGGATTGAGGACTTTGATGAAGCTTGGAAAGATGTTGAAATCCTTGAATCCAATGATCAAGAGATCACAGTTAGCAGTGAATCTGGGACAAAGGTTATAAGTAAATCATCTAATATTTATCCCAAAGATCCTGAATTTCCACCTGATGGTGTTGATGATATGACAAGGCTGGCATATCTGCATGAACCAGGGGTACTTCAAAATTTGCAAGTTCGATATGACGTAAATGAAATATATACATACACAGGAAATATATTGATAGCTGTGAACCCTTTCAGAAGGTTACCTCATTTGTATGCCAATGAAACAATGGCACGATATAAAGGCGCGGGCATTGGCGAGCACAGCCCACATCCTTTTGCAATCGCAGATTCTGCATATAGGAGAATGATAAACGATGGAGCGAGCCAAGCTATTTTAGTTAGTGGAGAAAGTGGGGCTGGTAAAACTGAAAGTACAAAGATGCTTATGCATTATCTTGCCTACATGGGAGGGAGAGCAGTAACTGAGGGGAGGTCCGTGGAGCAACAAGTTTTGGAGTCCAATCCTGTTTTAGAAGCATTTGGTAATGCAAAGACTGTCAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATACAGTTTGATCAAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACTTATTTGCTGGAACGGTCCCGTGTCTGTCAAGTTTCTGATCCTGAGAGAAATTATCATTGCTTCTATATGCTTTGTGCTGCACCAAAAGAGGATGTTAATAGGTTCAAATTAGGAAATCCAAGACAGTTTCATTATCTAAATCAATCAAATTGCTATGAGCTGGATGCGCTGGATGATTCTAAGGAGTACCTTGCAACCCGAAGAGCAATGGATGTTGTTGGCATCAGCTCTGATGAACAGGACGCTATATTTCGAATAGTTGCTGCAGTACTTCATTTAGGAAACATTGAATTTGTTAAGGGAGTGGATGATGGGACAGATTCCTCTCAACCGAAGGATGACCAGTCCCGTTTCCACCTAAAAACTGCAGCTGAACTTTTGATGTGTGACGAGCAATCCCTTGAAGACTCTTTCTGCAAACGAGTTATGGTGACTCGTGGGGAGGCCATAACAAGATCACTTGATCCGAATTCTGCAGCCCTCAGTAGAGATGCATTGGCTAAAATAGTTTATTCAAGGCTTTTTGACTGGATAGTGGACAAGATTAACAACTCCATTGGGCAAGATCCAAATTCGAAGAATTTAATTGGGGTTCTCGATATATATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATCAATTTGACAAATGAGAAGTTGCAGCAACATTTCAACCAGCATGTATTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAAATTGACTGGAGCTATATAGAATTCGTTGATAATCAGGATGTTCTTGATCTCATAGAAAAGATTGGACAAACAAAAGTGTTTCTGAGAGCAGGTCAAATGGCAGAACTAGATGCATGTCGTGCTGAGGTCTTAGGAAGATCTGCAACTGTTATTCAAAGAAATGGCCGGACATATATTTGTCGGAAACACTATGTTTTATTTCGGTTGTCCACCATAGAACTACAGAGGGTTGCAAGAGGACAACTTGCACGCTACCGGTATGAATACATGAGGAGGGAAGCTGCTTCTTTGAAAATCCAAAAACAATGTCGCATGTATATTTCCAGAACTGCTTACAAAACCATTTATGTCTCTGCTGTTCATATTCAAGCTGGTATGCGAGGGATGACAGCCAGGAATGACCTTAGATTCAGGAAGCGGACACAAGCTGCGATTGTTATTCAGAGTCACTGCAGAAGTTATTTAGCTCGCACTCGTTTCCGAAGGCTAAAGAAAGCAACAATAGCTGTACAATGTTCTTGGAGAAGAACAATTGCACGAAGAGAACTTCGAAAGCTTAGAATGGCTGCTAGGGAAGCCAAAGCTCTTGAAGCTGCCAAAGTTAATCTAGAAAAGCAAGTCGAAGAATTAACTTCGTGTCTAGAAACGGAGAAGAGAATGAGGGAAGCCAAGACACAGGAAAATGAAAAACTACAGTCTAGTTTGCATGAGATAGAGCTTCAGTTCCAAGAAGCTAAGGCAATGCTCGTTCAGGAACGTGAGGCTGCCAAAAAAGCAGCTGAACATATACAACAGTTTGCTGTCAATGCCGTTGACAATGAATTACTCAATAAGCTTACAGAAGAAAATGAACAACTCAAGGAGCAGGTTAGTTCATTCGAAAAGAAAACTAACGAGATTCCTGTCAATGTCGTTGACAATGAATTGCTCAATAAGCTTACAGCAGAAAATGAACAACTTAAGGAGCTGGTTAATTCATTCGAAAAGAAAACTACAAACGAGATTCCTGTCAACGTCGTTGACAATGAATTGCTCAATAAGCTTACAGCAGAAAATGAACAACTCAAGGAGTTGGTGAGTTCACTAGAAAAGAAAAGTACACACGAGTTTTCTGTTAATGTTACTGACAATGAATTGGTCAATAAGCTCACAGCAGAAAATGAACAACTCAAGGAGCTGGTTAATTCATTCGAAAAGAAAACTACAGATGAGTTTTCTGTTAATGTTACTGACAATGAATTGATCAATAAGCTTAGTGCAGAAAATGAGCAACTCAAGGAGCGGGTTAATTCATTCGAAAAGAAAACTACACACGAGTTTTCTGTTAATGTTCCGGATAATGAATTAATCAATAAGCTTAGTGCAGAAAATGAACAACTCAAGGAGATGGTAAATTCATTGGAAAAGAAAACCAAACTGGAACTCCCTGTTAATATTAGTGAGAATGAATTGATCAGTAAGCTTTCTTCAGAAAATGAACACTTCAAGGATCTGGTTAATTCATTGGAAAAGAAAATTGACGAAACAGAGAGGAAATATCAAGAAAGCAATAAGCTAAGTGATGACCGCATGACTCAAATTATGGAGACAGAAACAAGGATGATTGACTTAAAAACATCTATGCAAAGGCTTGAAGAAAAACTCTCTGATATGGAAACTGAAAATCAAGTTTTACGGCAGCAAACCTTGCTGAGTTCATCATCTAGGAGAATGTCAGGAAAGTTTTCACCTGCTGCAGTTCCGCCTTTGGAAAATGGTCATCAGGCACCACCAAGTTCTACACTTGCAAAACCATTTGGTTCAGAGTCTATGAGGAGATCTCAAATGGAGAGACAACATGAGAGTGTAGATGCTCTTTTCAAATGTGTGGCAAAAGAACTTGGATTTTCTGAAGGAAAACCTGTTGCAGCATTTACCATTTATAATTGTCTGCTACATTGGAAAGCTTTCGAAGCAGAAAAGACAAGTATATTTGATCGTCTTATTCAACTTATTGGTTCTGCAATAGAGGATCAGGACAACAATGATAACATTGCTTATTGGTTATCCAATACATCTGCGTTGTTGTTCCATCTTCAACGGTGTCTAAGAGTGCCTACAACAAAGAAACCACCCACTCCAACATCATTTTTTGGGAGGATGACCCAAGGTTTCCGCTCTTCCAACAGTCTTTCCAGTAGTGCATTTGATGTAGTGCATCAGGTCGATGCCAAGTATCCGGCTTTGCTTTTCAAGCAGCAGCTAGCAGCTTACGTGGAAAAGATTTATGGAATCATCAAAGAAAACTTGAAGAAAGATTTGTTACCACTTCTTTCTTCTTGCACTAAGGCACATAAAACAACAAATGACAACAACCAACCAGATGTTTCTTGGCTCAGCATTATCGAATGCCTTAATAAATTTCTCAAGATTCTGAAAGAAAATTATGTACATCCTGTTCTAGTTCAGAAGATATTTAACCAGATTTTCCAATACATCAATGTGGAAATCTTCAATAATCTTCTTTTGCATCAAGAATGCTGTACATTCATCAATGGAGAACATGTAAAAGCAGGATTGGCTGAACTAGAACTATGGTGTAGCGAAGCAACAGAGGAGTATGTTGGCTCTCCTCTGGATGAACTCAAACATGCGACGCAAGCAATTAGATTCTTGGTTGTACGGCAAAAGGATGGACTATCCTATGATGATCTTACAAATGACCTCTGCCCTGTCCTGAGTGCTCATCAGCTTTATAGAATATGTACACTTTATCAGGATGACAGTGACACTATGCAAAGTGTATCATCAGATGTCACAACTAGCTTGAAGTTTCTAATGTCAGATGACGAAGAAAACGATAGCAAATCCTTCTTGTTGGAAGACAATTCAAGTATTCCTATTATAGTTGAAGAGGTTTCTAGTTCCATTAAAGAAAAGACCATTCCCAAAGTAAAACCTCCTTCAGAACTTCTTGAGAATCCAGCCTTCCAATTTTTACATGATTATAGTTAG 4434 0.3908 MAGQLSFVVGSHIWIEDFDEAWKDVEILESNDQEITVSSESGTKVISKSSNIYPKDPEFPPDGVDDMTRLAYLHEPGVLQNLQVRYDVNEIYTYTGNILIAVNPFRRLPHLYANETMARYKGAGIGEHSPHPFAIADSAYRRMINDGASQAILVSGESGAGKTESTKMLMHYLAYMGGRAVTEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEDVNRFKLGNPRQFHYLNQSNCYELDALDDSKEYLATRRAMDVVGISSDEQDAIFRIVAAVLHLGNIEFVKGVDDGTDSSQPKDDQSRFHLKTAAELLMCDEQSLEDSFCKRVMVTRGEAITRSLDPNSAALSRDALAKIVYSRLFDWIVDKINNSIGQDPNSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKIGQTKVFLRAGQMAELDACRAEVLGRSATVIQRNGRTYICRKHYVLFRLSTIELQRVARGQLARYRYEYMRREAASLKIQKQCRMYISRTAYKTIYVSAVHIQAGMRGMTARNDLRFRKRTQAAIVIQSHCRSYLARTRFRRLKKATIAVQCSWRRTIARRELRKLRMAAREAKALEAAKVNLEKQVEELTSCLETEKRMREAKTQENEKLQSSLHEIELQFQEAKAMLVQEREAAKKAAEHIQQFAVNAVDNELLNKLTEENEQLKEQVSSFEKKTNEIPVNVVDNELLNKLTAENEQLKELVNSFEKKTTNEIPVNVVDNELLNKLTAENEQLKELVSSLEKKSTHEFSVNVTDNELVNKLTAENEQLKELVNSFEKKTTDEFSVNVTDNELINKLSAENEQLKERVNSFEKKTTHEFSVNVPDNELINKLSAENEQLKEMVNSLEKKTKLELPVNISENELISKLSSENEHFKDLVNSLEKKIDETERKYQESNKLSDDRMTQIMETETRMIDLKTSMQRLEEKLSDMETENQVLRQQTLLSSSSRRMSGKFSPAAVPPLENGHQAPPSSTLAKPFGSESMRRSQMERQHESVDALFKCVAKELGFSEGKPVAAFTIYNCLLHWKAFEAEKTSIFDRLIQLIGSAIEDQDNNDNIAYWLSNTSALLFHLQRCLRVPTTKKPPTPTSFFGRMTQGFRSSNSLSSSAFDVVHQVDAKYPALLFKQQLAAYVEKIYGIIKENLKKDLLPLLSSCTKAHKTTNDNNQPDVSWLSIIECLNKFLKILKENYVHPVLVQKIFNQIFQYINVEIFNNLLLHQECCTFINGEHVKAGLAELELWCSEATEEYVGSPLDELKHATQAIRFLVVRQKDGLSYDDLTNDLCPVLSAHQLYRICTLYQDDSDTMQSVSSDVTTSLKFLMSDDEENDSKSFLLEDNSSIPIIVEEVSSSIKEKTIPKVKPPSELLENPAFQFLHDYS* 1478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1115 1477 Coils Coil 825 845 - -
Lan11g1115 1477 ProSiteProfiles IQ motif profile. 598 624 IPR000048 GO:0005515
Lan11g1115 1477 ProSiteProfiles IQ motif profile. 548 576 IPR000048 GO:0005515
Lan11g1115 1477 ProSiteProfiles IQ motif profile. 643 672 IPR000048 GO:0005515
Lan11g1115 1477 MobiDBLite consensus disorder prediction 1067 1081 - -
Lan11g1115 1477 ProSiteProfiles Dilute domain profile. 1139 1422 IPR002710 -
Lan11g1115 1477 PANTHER MYOSIN HEAVY CHAIN 500 1474 - -
Lan11g1115 1477 PANTHER MYOSIN HEAVY CHAIN 5 500 - -
Lan11g1115 1477 Coils Coil 659 735 - -
Lan11g1115 1477 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan11g1115 1477 Gene3D - 622 672 - -
Lan11g1115 1477 Gene3D - 574 621 - -
Lan11g1115 1477 Gene3D - 524 573 - -
Lan11g1115 1477 ProSiteProfiles IQ motif profile. 572 598 IPR000048 GO:0005515
Lan11g1115 1477 SMART DIL_2 1297 1404 IPR002710 -
Lan11g1115 1477 CDD MyosinXI_CBD 1090 1444 IPR037975 GO:0007015
Lan11g1115 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 575 IPR027417 -
Lan11g1115 1477 PANTHER MYOSIN 5 500 - -
Lan11g1115 1477 PANTHER MYOSIN 500 1474 - -
Lan11g1115 1477 Gene3D Myosin VI head, motor domain, U50 subdomain 312 424 - -
Lan11g1115 1477 Pfam Myosin head (motor domain) 64 500 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan11g1115 1477 SMART iq_5 594 616 IPR000048 GO:0005515
Lan11g1115 1477 SMART iq_5 642 664 IPR000048 GO:0005515
Lan11g1115 1477 SMART iq_5 546 568 IPR000048 GO:0005515
Lan11g1115 1477 SMART iq_5 571 593 IPR000048 GO:0005515
Lan11g1115 1477 SMART iq_5 523 545 IPR000048 GO:0005515
Lan11g1115 1477 SMART iq_5 619 641 IPR000048 GO:0005515
Lan11g1115 1477 Coils Coil 930 950 - -
Lan11g1115 1477 Pfam DIL domain 1298 1401 IPR002710 -
Lan11g1115 1477 Gene3D Kinesin motor domain 65 440 IPR036961 -
Lan11g1115 1477 MobiDBLite consensus disorder prediction 1043 1090 - -
Lan11g1115 1477 Pfam IQ calmodulin-binding motif 621 641 IPR000048 GO:0005515
Lan11g1115 1477 Pfam IQ calmodulin-binding motif 526 544 IPR000048 GO:0005515
Lan11g1115 1477 Pfam IQ calmodulin-binding motif 574 593 IPR000048 GO:0005515
Lan11g1115 1477 Coils Coil 965 999 - -
Lan11g1115 1477 Gene3D - 441 500 - -
Lan11g1115 1477 ProSiteProfiles Myosin motor domain profile. 62 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan11g1115 1477 Coils Coil 860 880 - -
Lan11g1115 1477 ProSiteProfiles IQ motif profile. 620 649 IPR000048 GO:0005515
Lan11g1115 1477 Coils Coil 790 810 - -
Lan11g1115 1477 SMART MYSc_2a 56 682 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan11g1115 1477 Coils Coil 888 915 - -
Lan11g1115 1477 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan11g1115 1477 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan11g1115 1477 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan11g1115 1477 PRINTS Myosin heavy chain signature 431 459 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan11g1115 1477 PRINTS Myosin heavy chain signature 484 512 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan11g1115 1477 Gene3D - 252 310 - -
Lan11g1115 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 575 671 IPR027417 -
Lan11g1115 1477 Coils Coil 1007 1041 - -
Lan11g1115 1477 Coils Coil 749 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1115 Lan-Chr11 14770677 14789273 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1115 1 500 Myosins gene family AT1G04600 80.400 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1115 K10357 - gmx:100791031 1196.8