LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan11g1075	ATGTTTCTTCATTGGTGTCTCATTCTCTTGGTGGGTTTAGGAGTAGAGCATGGTAATGCTCAATATTACAGAAAAATTGGAAATAAATTGCTCCCTTATAAGACAATCTTTGTGGACCCATTAGGGCATGGAAATTTCACTACCATACAATCTGCTATTGATTCAGTGCCTTCAAACAATGTGAATTGGATTTCCATTAGGGTTAAAGCAGGTACCTACAGAGAAAAAGTGATTATTCCTTATGATAAGCCATACATTATACTAAAAGGAGCAGGAAAGAGGAAAACATTTATTGAATGGGATGATCATGATTCAACCTTTCAAAGCCCTACGTTTGCATCAATAGCTGACAATGTTGTAGTCAAATGCATGAGCTTCCGGAATTCATATAACAATCCAATAAATAATAAACCAAAGGTACCCGCAGTAGCTGCTATGATAATTGGTGACAAGTCTTATTTTTATAGAGTTGGATTCTTTGGTTTGCAAGACACTTTGTGGGATGTCCAAGGAAGACATTACTATAAACTTTGTACCATACAAGGTGCTATTGATTTTATCTTTGGTGCAGGCCAATCTTTATTTGAGAGATGTTCCATAAATGTTATTGCTGGTGCTTTAGAACCAGGCTTTTCTGGTTTTATAACAGCCCAAGGGAGACTAAATTCAACAGAATCAGATGGGTTTGTTTTCAACAATTGCCATGTGTTTGGAAATGGAACAACATACTTGGGAAGGCCATGGAGAAATTACTCTAGAGTTATTTTCTACAATACCAATATGTCTAACATTGTACAACCACTAGGTTGGGATCCATGGAGTTTTGCTGGATATGAGGATCGTATAACATTTTCAGAGTATGACAACTTTGGACCAGGTTCTAACACAAGCATGCGAGTGAGTTGGACTAAGAAGTTGGATTTGAAAACAATTAAAATGATGGCAAGTACGAAGTTCATTGACAATGACAAGGAAAAATGGCTTCAATACCAAATGCAATTCTAG	1005	0.3662	MFLHWCLILLVGLGVEHGNAQYYRKIGNKLLPYKTIFVDPLGHGNFTTIQSAIDSVPSNNVNWISIRVKAGTYREKVIIPYDKPYIILKGAGKRKTFIEWDDHDSTFQSPTFASIADNVVVKCMSFRNSYNNPINNKPKVPAVAAMIIGDKSYFYRVGFFGLQDTLWDVQGRHYYKLCTIQGAIDFIFGAGQSLFERCSINVIAGALEPGFSGFITAQGRLNSTESDGFVFNNCHVFGNGTTYLGRPWRNYSRVIFYNTNMSNIVQPLGWDPWSFAGYEDRITFSEYDNFGPGSNTSMRVSWTKKLDLKTIKMMASTKFIDNDKEKWLQYQMQF*	335

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan11g1075	334	ProSitePatterns	Pectinesterase signature 1.	60	79	IPR018040	-
	Lan11g1075	334	SUPERFAMILY	Pectin lyase-like	32	322	IPR011050	-
	Lan11g1075	334	Pfam	Pectinesterase	38	322	IPR000070	GO:0030599\|GO:0042545
	Lan11g1075	334	PANTHER	PECTINESTERASE 10-RELATED	9	331	-	-
	Lan11g1075	334	ProSitePatterns	Pectinesterase signature 2.	180	189	IPR033131	-
	Lan11g1075	334	PANTHER	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	9	331	-	-
	Lan11g1075	334	Gene3D	-	32	334	IPR012334	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan11g1075	Lan-Chr11	13797030	13801433	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan11g1075	8	279	Carbohydrate Esterase	AT2G19150	45.055	2.36e-77	237

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan11g1075	-		-	gmx:100819252	513.072

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