Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1075 ATGTTTCTTCATTGGTGTCTCATTCTCTTGGTGGGTTTAGGAGTAGAGCATGGTAATGCTCAATATTACAGAAAAATTGGAAATAAATTGCTCCCTTATAAGACAATCTTTGTGGACCCATTAGGGCATGGAAATTTCACTACCATACAATCTGCTATTGATTCAGTGCCTTCAAACAATGTGAATTGGATTTCCATTAGGGTTAAAGCAGGTACCTACAGAGAAAAAGTGATTATTCCTTATGATAAGCCATACATTATACTAAAAGGAGCAGGAAAGAGGAAAACATTTATTGAATGGGATGATCATGATTCAACCTTTCAAAGCCCTACGTTTGCATCAATAGCTGACAATGTTGTAGTCAAATGCATGAGCTTCCGGAATTCATATAACAATCCAATAAATAATAAACCAAAGGTACCCGCAGTAGCTGCTATGATAATTGGTGACAAGTCTTATTTTTATAGAGTTGGATTCTTTGGTTTGCAAGACACTTTGTGGGATGTCCAAGGAAGACATTACTATAAACTTTGTACCATACAAGGTGCTATTGATTTTATCTTTGGTGCAGGCCAATCTTTATTTGAGAGATGTTCCATAAATGTTATTGCTGGTGCTTTAGAACCAGGCTTTTCTGGTTTTATAACAGCCCAAGGGAGACTAAATTCAACAGAATCAGATGGGTTTGTTTTCAACAATTGCCATGTGTTTGGAAATGGAACAACATACTTGGGAAGGCCATGGAGAAATTACTCTAGAGTTATTTTCTACAATACCAATATGTCTAACATTGTACAACCACTAGGTTGGGATCCATGGAGTTTTGCTGGATATGAGGATCGTATAACATTTTCAGAGTATGACAACTTTGGACCAGGTTCTAACACAAGCATGCGAGTGAGTTGGACTAAGAAGTTGGATTTGAAAACAATTAAAATGATGGCAAGTACGAAGTTCATTGACAATGACAAGGAAAAATGGCTTCAATACCAAATGCAATTCTAG 1005 0.3662 MFLHWCLILLVGLGVEHGNAQYYRKIGNKLLPYKTIFVDPLGHGNFTTIQSAIDSVPSNNVNWISIRVKAGTYREKVIIPYDKPYIILKGAGKRKTFIEWDDHDSTFQSPTFASIADNVVVKCMSFRNSYNNPINNKPKVPAVAAMIIGDKSYFYRVGFFGLQDTLWDVQGRHYYKLCTIQGAIDFIFGAGQSLFERCSINVIAGALEPGFSGFITAQGRLNSTESDGFVFNNCHVFGNGTTYLGRPWRNYSRVIFYNTNMSNIVQPLGWDPWSFAGYEDRITFSEYDNFGPGSNTSMRVSWTKKLDLKTIKMMASTKFIDNDKEKWLQYQMQF* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1075 334 ProSitePatterns Pectinesterase signature 1. 60 79 IPR018040 -
Lan11g1075 334 SUPERFAMILY Pectin lyase-like 32 322 IPR011050 -
Lan11g1075 334 Pfam Pectinesterase 38 322 IPR000070 GO:0030599|GO:0042545
Lan11g1075 334 PANTHER PECTINESTERASE 10-RELATED 9 331 - -
Lan11g1075 334 ProSitePatterns Pectinesterase signature 2. 180 189 IPR033131 -
Lan11g1075 334 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 9 331 - -
Lan11g1075 334 Gene3D - 32 334 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1075 Lan-Chr11 13797030 13801433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1075 8 279 Carbohydrate Esterase AT2G19150 45.055 2.36e-77 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1075 - - gmx:100819252 513.072