Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1065 ATGCTTCCACTGCAATTCACTACTCATCCTCACCCTCCATCATCATCATCATTGCACATCACCAACCCCAACTCTTGTTCCTTTTGTCCCACGCCTCGCTCCCTTTTCAACACATGTATCAACAGCCGTCACCACCGCCTTCTTAGACGCAATGCGGGAGTAATCGCCGTTAGGATTTTCGCAATGTCCGGTAACTCCTCCTCTGCATTTAAGATGAATCTCAATGAGTACCTTGTCACTCTGGACAAACCCCTTGGCATCCGATTCGCTCTCACTGTTGACGGCAAAATCATCGTCCATTCTCTCACCAAAGGGGGTAATGCAGAGAGATCGAGGATAATTATGGTGGGTGACACGTTGAAGAAAGCTGGAGATTCATCTCAGAATAGTCTTGTAGAGATTAAAGACGTTGGAGATACAAAGAAGGTACTAAAGGAGCAAACGAGTTCTTTTAGCTTGATTCTTGAGAGGCCCACATCTCCTTTTCCCATTCAACTATTGCATACAATGAATGATCATGAAATATTCTTTAATATAGGTCGAGTTCCTATGGTAACCTGGAATAAGACACTATTGGCATCAAATTTTCAGGCATCTAGTGAGAGCTCTGGGAATTCTGGATTTTTGATGTTCAACTCAAAGTTTCTTAAATCAAAGGGAAGTACGTTATTGGTAAATCAAAATGAACATGCCATAACCCATGGTGAGAGAAAATTCTTTACTGAGCACATGCCTCAGCTGGTTTGTATTTTTACCGAAGAAGTGTGTGGAGATGGAGACTGGTCTCATGGAAGTTTTCCGATTGAGGAATATATTCAAGCTCTCAATCGTTCCAAGGATGAGATGTACTATAGTCACTCCCTTGGTTTGCGCTATAGTAAGATTACTGAGCAAATATATGTCGGATCCTGTATACAAACAGAAGATGATGTGGAAACCTTGTCAAAAGTTGAGGGAATTACTGCTGTTCTCAATTTCCAGAATGGAACTGAAGCTGAAAATTGGGGAATTGATGTAAAATCAATTAATGACTCATGTCAAAGGAATAATATTCTTATGATCAACTATCCTATACGGGATGGGGATTCTTATGATATGAGAAAGAAACTCCCATTTTGTGTCGGGCTTTTATTACGGTTGCTGAGGAAGAACCTTCGTGTTTTTGTTACTTGCACTTCTGGATTTGATCGGTCTCCTGCTTGTGTGATTGCATACCTGCATTGGATGACAGATGTTTCCCTTCATGCTGCTTATACTTGGGTCACCGGGATGCACACATGCCGGCCTGACAGACCCGCAATTGCTTGGGCTACATGGGATCTTATAGCTATGGTTGAAAGGGGCAAACACGATGGACCTCCCACACATGCCGTCACATTTGTGTGGAACGGTCATGAGGGAGAGGATGTAACTTTGGTTGGAGACTTTACTGGAAACTGGAAAGAACCACTCAGAGTAATGCACCAGGGTGGATCAAGACATGAAGTAGAAGTTAAACTTCCACAAGGAAAGTACTACTACAAGTTTGTTGTTAATGGACAATGGAAGCATTCAACCGCTTCACCAGCAGAAAGGGACGATAGCGGAAATGTGAACAATATAATTGTGATTGGTGAAACTGCCAGCGTTCGGCCTTTTGTACTGCATCAGCAGAAAGATGCCAACGTTGTCAAGGTGATCGAGAGGCTTTTGAACGAAAAAGAGCGGTTTATGTTGGCAAAAGCAGCTCGCTGTATTGCTTTTTCTGTCTGTCCAATCAGATTAGCCCCCAAATAG 1776 0.4274 MLPLQFTTHPHPPSSSSLHITNPNSCSFCPTPRSLFNTCINSRHHRLLRRNAGVIAVRIFAMSGNSSSAFKMNLNEYLVTLDKPLGIRFALTVDGKIIVHSLTKGGNAERSRIIMVGDTLKKAGDSSQNSLVEIKDVGDTKKVLKEQTSSFSLILERPTSPFPIQLLHTMNDHEIFFNIGRVPMVTWNKTLLASNFQASSESSGNSGFLMFNSKFLKSKGSTLLVNQNEHAITHGERKFFTEHMPQLVCIFTEEVCGDGDWSHGSFPIEEYIQALNRSKDEMYYSHSLGLRYSKITEQIYVGSCIQTEDDVETLSKVEGITAVLNFQNGTEAENWGIDVKSINDSCQRNNILMINYPIRDGDSYDMRKKLPFCVGLLLRLLRKNLRVFVTCTSGFDRSPACVIAYLHWMTDVSLHAAYTWVTGMHTCRPDRPAIAWATWDLIAMVERGKHDGPPTHAVTFVWNGHEGEDVTLVGDFTGNWKEPLRVMHQGGSRHEVEVKLPQGKYYYKFVVNGQWKHSTASPAERDDSGNVNNIIVIGETASVRPFVLHQQKDANVVKVIERLLNEKERFMLAKAARCIAFSVCPIRLAPK* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1065 591 CDD E_set_AMPKbeta_like_N 458 537 - -
Lan11g1065 591 ProSiteProfiles PDZ domain profile. 78 159 IPR001478 GO:0005515
Lan11g1065 591 SUPERFAMILY E set domains 455 538 IPR014756 -
Lan11g1065 591 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 51 591 - -
Lan11g1065 591 Pfam Glycogen recognition site of AMP-activated protein kinase 458 539 IPR032640 -
Lan11g1065 591 SUPERFAMILY PDZ domain-like 82 171 IPR036034 GO:0005515
Lan11g1065 591 Gene3D Immunoglobulins 445 541 IPR013783 -
Lan11g1065 591 ProSiteProfiles Dual specificity protein phosphatase domain profile. 291 453 IPR020422 GO:0006470|GO:0008138
Lan11g1065 591 CDD DSP_laforin-like 290 436 IPR045204 GO:0019203|GO:0046838
Lan11g1065 591 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 51 591 IPR030066 GO:0005983
Lan11g1065 591 Gene3D Protein tyrosine phosphatase superfamily 284 545 IPR029021 -
Lan11g1065 591 Pfam Dual specificity phosphatase, catalytic domain 300 421 IPR000340 GO:0008138|GO:0016311
Lan11g1065 591 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 282 424 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1065 143 591 Protein tyrosine phosphatase (PTP) family AT3G01510 67.261 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1065 - - gmx:100814503 1013.06