Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0999 ATGGATAGTATATTGGGTCTTCTCAAACTTCGTATTAAAAGAGGAATTAATCTTGCAATTCGTGATGCTCGTACCAGTGACCCTTATGTTGTTGTTCATTTTGGCGATCAGAAGCTGAAGACTCGTGTCATAAAAAACAACTGCGACCCTGAGTGGAATGAGGAATTGACCCTTTCTGTTGGGAATGTTGAAACTCCTATACAACTTACAGTTTATGACAAAGACACATTCTCTGTGGATGACAAAATGGGTGATGCAGAAGTAGACATAAAGCCATATATTCAAAGTGTGAAGATGGGGTTGAACAAGCTCCCAAATGGGTGTTCAGTGAAGAGGATTCTACCAAATAGGAATAACTGTCTTGCTGAAGAGAGCAACTGCATTTGGCACAATGGAAATATTATCCAAGAAATGATTTTAAGATTGAAAAATGTTGAGTGTGGTGAAGTGGTTGTTGAAATTGAGTGGGTTGATATTCCAGGATGCAAGGGCTTATCAGAGGTAGAATTTTAA 513 0.386 MDSILGLLKLRIKRGINLAIRDARTSDPYVVVHFGDQKLKTRVIKNNCDPEWNEELTLSVGNVETPIQLTVYDKDTFSVDDKMGDAEVDIKPYIQSVKMGLNKLPNGCSVKRILPNRNNCLAEESNCIWHNGNIIQEMILRLKNVECGEVVVEIEWVDIPGCKGLSEVEF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0999 170 CDD C2_ArfGAP 5 148 - -
Lan11g0999 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Lan11g0999 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 163 - -
Lan11g0999 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 100 IPR035892 -
Lan11g0999 170 Pfam C2 domain 7 92 IPR000008 -
Lan11g0999 170 SMART C2_3c 7 102 IPR000008 -
Lan11g0999 170 Gene3D C2 domain 4 162 IPR035892 -
Lan11g0999 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0999 Lan-Chr11 10923042 10925947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0999 38 166 C2H2 Transcription Factor Family AT1G70790 66.412 2.90e-61 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0999 - - gmx:100788395 287.345