Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0990 ATGGAGCTTCTTTACAAAGCCACAACCGCTATCACTATTGTCTACTCCAATATTCATAATTCACTATTGTATACCCACATTACATACATTGTGTTAATATCTACCAATGCTCGTGTCATACCCTTGCAACCAAGCAATGCTCCTGTCACACTATGCATCTCTATCAATGACCGTTTTACATCTTGTATCGAAGTCATTGTCAGTGTTCAACTATGCATGAAAGTCAGTGAGCGTTCGTTTACTACAACAGATGATGCAGTAGCGGCTGCATCTATGATTTGCAATCATGAAGTCCAGTTTAAAATTGTCATGGCTAAAGTCAACATGCCTGGCATGAATAACCTTTCTTTTTTCAACATGTTGCATGAGAAGGGCATTCCTCTTATATATATCATCTCAAGAGACTTTGATGTTAATACTTGGGATTTATTACTTCAAGGATCATGTTATTTCTTCAAGGAGCCAATCCAGTCAAAAAATATTAATCATGTGTGGGAACATTTATTTCCCTCAAAAGCTGCTCAAAATGAAAACTGTGAAAACAAGTTCAAAACCACAGAAGGCCATGTTGATAAAGCAAATAGAATGGAGTCTAACAACCATGGCAATACTGAAAAGGGGTGTGTGGAAATAAGAGAACAAATTATAGCTGGTGGTAGAAAGCGTATTGTTTGGACTCAAGAGCTGCATAATAAGTTCACTGAAGCTATAGCTATGCTACGCTACCATAAAACTTCTCCTAAAGAGATACAACGTATAATGAATGTACCTGGTTTGACAACTGCTCATATTTCAAGTCATATGCAGGTTCTTTTCTATTACTTCAACTTAGACATGCAATAA 843 0.3677 MELLYKATTAITIVYSNIHNSLLYTHITYIVLISTNARVIPLQPSNAPVTLCISINDRFTSCIEVIVSVQLCMKVSERSFTTTDDAVAAASMICNHEVQFKIVMAKVNMPGMNNLSFFNMLHEKGIPLIYIISRDFDVNTWDLLLQGSCYFFKEPIQSKNINHVWEHLFPSKAAQNENCENKFKTTEGHVDKANRMESNNHGNTEKGCVEIREQIIAGGRKRIVWTQELHNKFTEAIAMLRYHKTSPKEIQRIMNVPGLTTAHISSHMQVLFYYFNLDMQ* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0990 280 Gene3D - 64 190 - -
Lan11g0990 280 SUPERFAMILY CheY-like 80 182 IPR011006 -
Lan11g0990 280 Gene3D - 219 275 - -
Lan11g0990 280 SUPERFAMILY Homeodomain-like 219 275 IPR009057 -
Lan11g0990 280 PANTHER TWO-COMPONENT RESPONSE REGULATOR 79 272 IPR045279 GO:0009736
Lan11g0990 280 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 221 272 IPR006447 GO:0003677
Lan11g0990 280 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR11-LIKE 79 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0990 Lan-Chr11 10815131 10818022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0990 48 275 Response Regulator Gene Family AT2G25180 24.691 1.17e-22 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan11g0990 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0990 - - lang:109359713 570.852