Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0978 ATGTTTGAAGGTTTCTCATCATTATGCACTGCCTTCAACTATAATGTCAGTGACATTATTGTTCCTCATGATTCTCCTATGATGTCTTTGCAGATACTAAACACTTTTAAATTCATTAGATGCAATCGTAATCGCTATGATGCCAATGAAAATATTCCAGTATATCATAGATGTAGTGACTATGATATCTACCATGGTCATGAATTTTATTATTTTTATGAACATGAACATTTAGATGGATGCTCAGCTATTCAGCTTCCAGTTGCACTGCCACCTATTTTTGTTGACCCATTGCAAATCACATTAAGTTCCGAGCTCGTCGTTGAAGTAACATTATCGGAACCTTGTTTTGATTGCTATCATGTAAGAAGAGGTCAATGCAGAGCAGACAAAGGAAACATCTCGTGTGTCAACACCAATGATGTTCGACAGCAACAACAGCCAAACTTTGCCACTGGTATATCTATTGGATTGGCAATCATGATTATAATTGCCTTGTTTGTTATTCTCTTTATGCACAAACGAAGGTACAACAAATCTTCATGCAACCAAAACCAACCAAGAAACATTAATTCTGCCCCCTCCTCAAATATCATCACAGAAACTGGAACTGTGATCTACTTTGGAATCCCCGTTTTCTCCTACGAGGAGCTCCAAGAGGCAACAAATAATTTTGACCAAGCTAGAGAGCTTGGAGAAGGAGGGTTTGGGACTGTTTACCATGGGAAGCTTCGAGATAGACGTGAAGTTGCAGTGAAGCGCCTATACGAGCACAACTACAGGCCAGTAGAATCATTCATAAATGAAATTCAGATCCTCACGCGCCTGCACCACACGAATCTCGTGTCCCTCTATGGCTGCACTTCTCGTCACAGCCACGAGCTGCTGCTAGTGTACGAATATGTCCCGAATGGCACTCTTGATTCTCATCTTCATGGTGATAAGGCAAAGCCTGGCCTAATGCCATGGCATGTGAGAATGAAAATTGCCATAGAGACTGCTAGCGCATTGTGCTACCTCCATGCCTCAGACATCATTCACCGAGATGTGAAAACCAGCAACATTCTACTTGAGAATAACTTTTGTGTCAAAGTTGCAGATTTTGGGCTTTCAAGACTTTTTCCAATTGATGTCACACATGTTTCCACAGCTCCTAGGGGAACCCCAGGTTATGTTGACCCGGACTACCATATATGCTACCAGCTTACAAGCAAGAGTGATGTTTATAGCTTCGGAGTTGTTCTAGTTGAGCTAATATCATCTTTACCAGCAGTTGATATGAATAGGGAGAGAGAAGAGGTTAAGTTGGCAAATCTAGCTGTAAAGAAGTTTCGAAGAAAGGCGTTTTCGGAGTTGGTTGATCCTTCCCTTGGTTTTCATTCTGATGAGAACTTGGAAAGGATGATAACTTCTGTTGCAGAATTGGCTTTTCAGTGTTTGCAAAGGGACAAAGATTTAAGACCCTCAATGGGTGAAGTATTGGAGGTATTGCAGAGAATTGAAAGTAGTAATGATGTTCCGGGGAATTTAGAGGGAATTGATGTTCATTGTGCTGAGACTTCCTGTAGTTATGCACTTCCAAACACTCTGATGAAGCCACAGCGCCTTCACCAAACACTATGA 1623 0.4128 MFEGFSSLCTAFNYNVSDIIVPHDSPMMSLQILNTFKFIRCNRNRYDANENIPVYHRCSDYDIYHGHEFYYFYEHEHLDGCSAIQLPVALPPIFVDPLQITLSSELVVEVTLSEPCFDCYHVRRGQCRADKGNISCVNTNDVRQQQQPNFATGISIGLAIMIIIALFVILFMHKRRYNKSSCNQNQPRNINSAPSSNIITETGTVIYFGIPVFSYEELQEATNNFDQARELGEGGFGTVYHGKLRDRREVAVKRLYEHNYRPVESFINEIQILTRLHHTNLVSLYGCTSRHSHELLLVYEYVPNGTLDSHLHGDKAKPGLMPWHVRMKIAIETASALCYLHASDIIHRDVKTSNILLENNFCVKVADFGLSRLFPIDVTHVSTAPRGTPGYVDPDYHICYQLTSKSDVYSFGVVLVELISSLPAVDMNREREEVKLANLAVKKFRRKAFSELVDPSLGFHSDENLERMITSVAELAFQCLQRDKDLRPSMGEVLEVLQRIESSNDVPGNLEGIDVHCAETSCSYALPNTLMKPQRLHQTL* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0978 540 SUPERFAMILY Protein kinase-like (PK-like) 209 505 IPR011009 -
Lan11g0978 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 345 357 IPR008271 GO:0004672|GO:0006468
Lan11g0978 540 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 98 505 IPR044652 -
Lan11g0978 540 Gene3D Phosphorylase Kinase; domain 1 199 301 - -
Lan11g0978 540 SMART serkin_6 225 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0978 540 Pfam Protein tyrosine and serine/threonine kinase 228 496 IPR001245 GO:0004672|GO:0006468
Lan11g0978 540 Gene3D Transferase(Phosphotransferase) domain 1 302 507 - -
Lan11g0978 540 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Lan11g0978 540 Coils Coil 427 447 - -
Lan11g0978 540 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 98 505 - -
Lan11g0978 540 ProSiteProfiles Protein kinase domain profile. 225 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0978 Lan-Chr11 10562185 10565429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0978 7 502 Receptor kinase-like Gene Family AT1G25390 50.000 4.38e-156 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan11g0978 PK_Tyr_Ser-Thr 6.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0978 - - ahf:112802646 536.569