Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0967 ATGGCTGAAAGTTATGGAGGTGTGGATGAAAAGGGGAACAAGGTGGAGAAAAGAAGAGGAGGGAGATTGAAGAAAAAGACTCAGCCCAGGTTTGCATTTCAGACTAGAAGTGCTAATGATATTCTTGATGATGGTTACCGTTGGAGAAAATATGGCCAGAAAGCTGTCAAGAACAGCATATATCCCAGCTACTACCGCTGCACGCATCACACATGCAACGTGAAGAAACAGGTGCAAAGGTTATCCAATGACACAAGCATTGTGGTGACAACTTACGAGGGAATTCACAATCATCCATGCGAGAAATTGATGGAAACACTAACTCCTCTTCTGAAGCAAATGCAATTTCTCTCTAGGTTCTAA 363 0.427 MAESYGGVDEKGNKVEKRRGGRLKKKTQPRFAFQTRSANDILDDGYRWRKYGQKAVKNSIYPSYYRCTHHTCNVKKQVQRLSNDTSIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLSRF* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0967 120 Gene3D WRKY domain 26 100 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g0967 120 SMART WRKY_cls 42 100 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g0967 120 ProSiteProfiles WRKY domain profile. 37 101 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g0967 120 SUPERFAMILY WRKY DNA-binding domain 35 100 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g0967 120 MobiDBLite consensus disorder prediction 1 27 - -
Lan11g0967 120 Pfam WRKY DNA -binding domain 43 99 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g0967 120 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 116 IPR044810 GO:0003700
Lan11g0967 120 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 10 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0967 Lan-Chr11 10089060 10092041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0967 8 120 WRKY Transcription Factor Family AT5G41570 65.789 4.98e-54 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan11g0967 WRKY 2.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0967 - - lang:109359511 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0967 11 10089060 10092041 Lan2g0766 2 16170156 16173239 LSH