Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0960 ATGGTATCCGTTAACCCTAATCCGTCTCAAGGCTTTTACTTCTTCGATCCTTCTAGTATGGCCCTTCCCGGCGTCAATCCTCTCCCTCCGCCACAACCACCTGCTCCGACCGCCGCGGATTCCTCCACCTCCGCCGCTTCATCTTCTACCGTTATCGTGATCGAGGATCTGAGTAAGAAGATTCGGAAACCATATACTATTACTAAGTCTAGAGAGAGCTGGACTGAGCAGGAACATGACAAGTTTCTAGAAGCTCTCCAATTATTTGATCGTGACTGGAAAAAGATTGAAGCATTTGTCGGCTCTAAAACAGTTATCCAGATACGTAGTCATGCGCAAAAGTATTTTCTTAAAGTCCAGAAAAACGGAACGAGTGAACATGTACCTCCCCCTCGGCCAAAAAGAAAAGCTGCTCACCCATATCCTCAAAAGGCTCCTAAAACCACTCCTACTGCATCCCAAGTCACAGGGCCATTGCAATCTTCAAATGCGTTCATTGAACCTGCATACATTTATAGCTCAGATTCATCATCTGTACTTGGAACTCCAGTTATCAATGTGCCTCTATCATCTTGGAATCGTAATGCTATACCACCAGTCAGTGTGCCACAAGTGACCAAAGTAACGCCAGATTTTTCACAAGTCTACAGATTCATTGGCAGTGTATTTGATCCAGATTCAGCTAACCACCTACAGAGACTGAAACAGATGGACCCAATAAATGTGGAAACGGTATTGTTGTTGATGAGAAACCTCTCCATCAATTTAATGAGTCCTGAATTTGAGGATCATAAGAGGCTGCTTTCATCATATGATGCCGACTCTGGAAAGAAGAAGCTTGGTAATCTTTCCAGCAAATCCCTTCCTGATAAATCTAAGGGTGCTATTCTATCTGCTTAA 900 0.4378 MVSVNPNPSQGFYFFDPSSMALPGVNPLPPPQPPAPTAADSSTSAASSSTVIVIEDLSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKTTPTASQVTGPLQSSNAFIEPAYIYSSDSSSVLGTPVINVPLSSWNRNAIPPVSVPQVTKVTPDFSQVYRFIGSVFDPDSANHLQRLKQMDPINVETVLLLMRNLSINLMSPEFEDHKRLLSSYDADSGKKKLGNLSSKSLPDKSKGAILSA* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0960 299 MobiDBLite consensus disorder prediction 23 46 - -
Lan11g0960 299 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 69 118 IPR006447 GO:0003677
Lan11g0960 299 CDD SANT 73 116 IPR001005 -
Lan11g0960 299 PANTHER SWI/SNF COMPLEX-RELATED 2 207 - -
Lan11g0960 299 PANTHER SWI/SNF COMPLEX-RELATED 207 293 - -
Lan11g0960 299 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Lan11g0960 299 MobiDBLite consensus disorder prediction 274 299 - -
Lan11g0960 299 Pfam Myb-like DNA-binding domain 71 116 IPR001005 -
Lan11g0960 299 MobiDBLite consensus disorder prediction 23 37 - -
Lan11g0960 299 ProSiteProfiles SANT domain profile. 69 122 IPR017884 -
Lan11g0960 299 Gene3D - 74 121 - -
Lan11g0960 299 PANTHER MYB TRANSCRIPTION FACTOR 207 293 - -
Lan11g0960 299 PANTHER MYB TRANSCRIPTION FACTOR 2 207 - -
Lan11g0960 299 MobiDBLite consensus disorder prediction 120 157 - -
Lan11g0960 299 SUPERFAMILY Homeodomain-like 65 121 IPR009057 -
Lan11g0960 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Lan11g0960 299 SMART sant 70 118 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0960 Lan-Chr11 9856018 9862605 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan11g0960 Myb_DNA-binding 2.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0960 - - gmx:778090 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0960 11 9856018 9862605 Lan11g0960 11 9856018 9862605 ECH