Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0951 ATGGGTTTCCCCGTTGGTTACACACAAGTTTTCTTCCCAAACCTCTTCCTCCATATCCTCATCTTCCTCGGATTCCTCCGAAACCTCGTTTTCATCCTCTTCCACTATCTCGGACTCTCCGACCTACTCGAAACCGACGTCGTTTGGCCCGAACCCACCCGAATCCCCGACACCAAAAAATCTCCATCCCTCTCCGCCATCCTCATCCGCGAACTCCTCCCAGCCATTCAATTCTCCGACCTCGACTCCACCAGCGCCGCCGTGACCGCGGCGGAGAGTGGCTGCGCGGTGTGCTTGTACGAATTTTCCGGTGAGGATGAAATAAGGTGCTTGAGGAACTGTAAGCACATTTTCCATAGAGGGTGTGTGGACCGTTGGATTGATCATGATCAGAAGACGTGTCCTCTTTGTAGGACACCTTTTGTACCTGATGAGATGATTGATGATTATAATCAACGGCTTTGGGCTGCTTCTGGTGTTGCTGAGTTCTACGCGGAATACAGTACTTCTTTCTGA 516 0.5116 MGFPVGYTQVFFPNLFLHILIFLGFLRNLVFILFHYLGLSDLLETDVVWPEPTRIPDTKKSPSLSAILIRELLPAIQFSDLDSTSAAVTAAESGCAVCLYEFSGEDEIRCLRNCKHIFHRGCVDRWIDHDQKTCPLCRTPFVPDEMIDDYNQRLWAASGVAEFYAEYSTSF* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0951 171 Pfam Ring finger domain 95 138 IPR001841 -
Lan11g0951 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 145 IPR013083 -
Lan11g0951 171 PANTHER BRH1 RING FINGER PROTEIN 1 168 - -
Lan11g0951 171 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 168 - -
Lan11g0951 171 SUPERFAMILY RING/U-box 94 145 - -
Lan11g0951 171 SMART ring_2 95 137 IPR001841 -
Lan11g0951 171 ProSiteProfiles Zinc finger RING-type profile. 95 138 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0951 Lan-Chr11 9740883 9741568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0951 1 161 C3H Transcription Factor Family AT1G63840 47.273 1.17e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0951 K16281 - mnt:21404323 258.84