Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan11g0949 | ATGGGAGGTTGCTGTTGTTCCGCCAGAAAACCTCACCTGCCGGGAACACCAGTGTATTACTATTACCCACCGTCTTTGGCAGAGCGCGAGTCATTGAACACTACTGATGGTTCGTCTGCTTCACTCACGGCTGGATTGCTGGTAGGCTTGGACCTAGAATCATCCACACCCGATACATATCAGTCCCCTCCTGCACCTCTGCCGTATGATACAGTCCTAGGAGTTCCAGCATCAACATACTCTGAAGCAGGCAGAGAAACACCTAGCGGTACTAGTTTTGAAACTTCAGTTAGATGTGAGGATCTCATTGAATCGGAATGCAAAGCTCAAGCTGATTCCGAACCCATGTCTCCAAAGAAACCAGAACTGTCAAAATCAAATGAATCTCATGCATTAGCGACAGAAGAAGAGGATGTCTGTCCAATCTGCCTTGAAGAATATGATGTCGAGAATCCTAAAAATCTGACAAACTGTGATCATCAGTTTCACCTCTCTTGCATTCTTGAGTGGATGGAAAGAAGTGACTCCTGTCCGATATGTGATCAGGATATGATATTTGACGAAATGACACTGAACTAG | 579 | 0.4542 | MGGCCCSARKPHLPGTPVYYYYPPSLAERESLNTTDGSSASLTAGLLVGLDLESSTPDTYQSPPAPLPYDTVLGVPASTYSEAGRETPSGTSFETSVRCEDLIESECKAQADSEPMSPKKPELSKSNESHALATEEEDVCPICLEEYDVENPKNLTNCDHQFHLSCILEWMERSDSCPICDQDMIFDEMTLN* | 193 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan11g0949 | 192 | SMART | ring_2 | 140 | 180 | IPR001841 | - | |
Lan11g0949 | 192 | SUPERFAMILY | RING/U-box | 134 | 187 | - | - | |
Lan11g0949 | 192 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 116 | 189 | IPR013083 | - | |
Lan11g0949 | 192 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 1 | 188 | - | - | |
Lan11g0949 | 192 | Pfam | Ring finger domain | 139 | 180 | IPR001841 | - | |
Lan11g0949 | 192 | ProSiteProfiles | Zinc finger RING-type profile. | 140 | 181 | IPR001841 | - | |
Lan11g0949 | 192 | MobiDBLite | consensus disorder prediction | 108 | 131 | - | - | |
Lan11g0949 | 192 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHB1A-RELATED | 1 | 188 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan11g0949 | Lan-Chr11 | 9718835 | 9725395 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan11g0949 | 1 | 188 | C3H Transcription Factor Family | AT4G00335 | 55.851 | 8.20e-71 | 211 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan11g0949 | - | - | adu:107472508 | 312.383 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan11g0949 | 11 | 9718835 | 9725395 | Lan1g0756 | 1 | 17639953 | 17645385 | LSH | |
Lan11g0949 | 11 | 9718835 | 9725395 | Lan1g2027 | 1 | 35418744 | 35422770 | LSH |