Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0948 ATGCTTCATTATTATCACCTCATCTTCATTCTCCTCCTTACACTTACTACCAAACACTCTCATTCAACTTCCAATATCCTCATAACATCAAACACTACAATCTTCAGCGACAACAAAACCTTTGAACTTGGTTTCTTCAACTTCACCCCAACATCCAAACACTACTACCTCGCTATCCGCTACGCTTCACTCACTAATCCTTTCTGCACCTGGCTCGCTAATCGTCAAAATCCCCTTTCTACCCTTTCCCATTCCTCTCTCCAATTAACACAAACCGGTAGGTTAATTTTAACTGATTCTTCAACTTCCTTCCAGATCAACACCAACACCGACAACAGTAATAACAACTTTTCCGGTTCTACCCTTCGGTTGTTAGAAAACGGAAACCTACTTCTTCTGACCCAAAACGGCACCGTTTTATGGCAGAGTTTTGATTATCCAACTGATACGTGGCTTCCTGGTATGAATCTCACGCGCTCTCGATCTTTAATCTCTTGGCGCACCAAAACGGATCCCTCTCCGGGTTTTTATTCTCTGCGGCTGAGACCACCGGATTACGGTGAGTTCGAGCTTGTTTTTAACAACACTGAATCGTTCTGGTCAACCGGTAACTGGACCGGCCAGTCATTTCTCAATGTTCCTGAAATGACTATTCCTTATATTTACCGGTTTGATTTCGAGGACCCGTTTTCGCCTTCCGCGTCTTTCGGGTTCTCGGAGCGGGCTTTGGAGAATGGGTTGGAACCGCCAACGCTCTTTCGGGTTGAACCGTTTGGGCAGGTTCGGCAGTACACGTGGTCGAAGGAGTCTCGTTCTTGGAACATGTTTTGGTCCAAACCTGAGAAAATTTGTCAGGTTCGGGGCTTGTGTGGGAGATTCGGTATTTGCAGCAGTGACGAGACCACCGAGACCGCGATATCGGTCTCGAGGTTTTGTGATTGTGTTAAAGGTTACGAGCCTGTGGATGTTGAGGGTTGGAGGAATGGTGAGTATTTTGGTGGTTGTAAGCGTGAAGATGGTGAAATTTGTAATGTGAGTGATGGTTTTGATGATCTAGGTTTTGTTGTGAAGTTTGATATGTTTAATGTGAGCTCTTTGATGATGAAAACTAGAAAAATTTGTGAGCATGAGTGTTTGAACTCTTGTAATTGTGTTGGTTTGTCTTACAATGAAGGGAGTGGTATTTGTAGGAATTTTTATGGGTCACTTTTCGATTTTAAGAACTCGACTAGTTCTAGTGATGGGGCTTTGTATGTTAGGGTTCCAAAAGAGGGATCTTTGATAAAGAAAAGGTTTAATGGTAAAGTTTTGGTTGCTGTCGTTATTGGGTCGGCTTTGGTTTTGGGTGTGTTGGTGGTGTCATTGTTGGTTTTGATCAAGATGAGACTGAAGAAGAAGGGGAATGAGGAAAATGTATCTGTTCCTATCTTGAATTTGCAGGTGTTTAGTTACAAAGAGCTTCAGTTGGCGACTCGAGGGTTTTCGGATAAGGTTGGACACGGTGGGTTTGGGACAGTGTTTCTAGGGGAATTAAGTGATTCTAGTCTTGTTGCTGTGAAGCGATTGGAGAGGCCAGGGGGTGGGGAGAAAGAGTTCAGGGCAGAAGTGTCCACAATTGGGAATATTCAGCATGTTAATCTCGTGACACTTAGAGGGTTTTGCTCTGAGAATTCTCATAGGCTTTTGGTTTATGAGTACATGCAAAATGGTGCCCTCAGTGCTTATCTGCGGAAAGAAGGGCCTAGTTTGAGCTGGGATGTTAGGTTCCGGGTAGCGATTGGAACAGCTAAAGGCATAGCATATTTACATGAGGAATGTAGGTGCTGTATTATCCACTGTGATATCAAGCCTGAAAACATCCTTTTAGATAATGATTTCACTGCGAAAGTTTCGGATTTTGGATTAGCAAAGCTCATTGGCAGGGACTTCAGTAGGGTGTTGGCAACCATGAGGGGTACATGGGGATATGTTGCTCCAGAGTGGATTTCCGGTGTGGCAATTACCACAAAAGCTGATGTCTACAGCTATGGAATGACGTTGCTTGAACTAATTAGTGGTCGTCGGAATGTGCTGGCGCCACCATCTGCTGGTGGTGGAGAGAATAATGGTTGTGAGACAGGAGATAAATGGTTTTTTCCTCCATGGGCTGCACAGCAGATAATCGAGGGAAACATGACTGATGTTTTTGACAAGAGGCTGGGAAATGTATATAACATTGAAGAGGCTAGGAGGGTTGCATTGGTGGCAGTTTGGTGCATTCAGGATGATGAGACCGTGAGACCTACAATGAATATGGTGGTGAAAATGTTAGAAGGGTTAGTGGAAGTTAATGTTCCTCCGCCTCCGAAGTTGCTACAAGCATTGGTTACTGGAGAGTCCTTTCATGGGGTCAAGGCTGATGATTCTGAGACTGGGGTATCCACTGGTGGAAGCTTATCTGTTACCAACTTGGAAGTGTCAATTGCTGATTCAGAGTCATATATAGGGGATATTTTGGATATGAATGTGAATGTTAGATAG 2520 0.4405 MLHYYHLIFILLLTLTTKHSHSTSNILITSNTTIFSDNKTFELGFFNFTPTSKHYYLAIRYASLTNPFCTWLANRQNPLSTLSHSSLQLTQTGRLILTDSSTSFQINTNTDNSNNNFSGSTLRLLENGNLLLLTQNGTVLWQSFDYPTDTWLPGMNLTRSRSLISWRTKTDPSPGFYSLRLRPPDYGEFELVFNNTESFWSTGNWTGQSFLNVPEMTIPYIYRFDFEDPFSPSASFGFSERALENGLEPPTLFRVEPFGQVRQYTWSKESRSWNMFWSKPEKICQVRGLCGRFGICSSDETTETAISVSRFCDCVKGYEPVDVEGWRNGEYFGGCKREDGEICNVSDGFDDLGFVVKFDMFNVSSLMMKTRKICEHECLNSCNCVGLSYNEGSGICRNFYGSLFDFKNSTSSSDGALYVRVPKEGSLIKKRFNGKVLVAVVIGSALVLGVLVVSLLVLIKMRLKKKGNEENVSVPILNLQVFSYKELQLATRGFSDKVGHGGFGTVFLGELSDSSLVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVTLRGFCSENSHRLLVYEYMQNGALSAYLRKEGPSLSWDVRFRVAIGTAKGIAYLHEECRCCIIHCDIKPENILLDNDFTAKVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTLLELISGRRNVLAPPSAGGGENNGCETGDKWFFPPWAAQQIIEGNMTDVFDKRLGNVYNIEEARRVALVAVWCIQDDETVRPTMNMVVKMLEGLVEVNVPPPPKLLQALVTGESFHGVKADDSETGVSTGGSLSVTNLEVSIADSESYIGDILDMNVNVR* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0948 839 Gene3D - 17 144 IPR036426 -
Lan11g0948 839 ProSiteProfiles Bulb-type lectin domain profile. 19 145 IPR001480 -
Lan11g0948 839 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 7 830 - -
Lan11g0948 839 SMART blect_4 25 147 IPR001480 -
Lan11g0948 839 CDD STKc_IRAK 498 773 - -
Lan11g0948 839 Gene3D Transferase(Phosphotransferase) domain 1 567 778 - -
Lan11g0948 839 Pfam D-mannose binding lectin 70 161 IPR001480 -
Lan11g0948 839 PIRSF SRK 1 825 IPR024171 GO:0004674
Lan11g0948 839 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Lan11g0948 839 ProSiteProfiles PAN/Apple domain profile. 343 422 IPR003609 -
Lan11g0948 839 SUPERFAMILY Protein kinase-like (PK-like) 470 771 IPR011009 -
Lan11g0948 839 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 7 830 - -
Lan11g0948 839 Gene3D Phosphorylase Kinase; domain 1 457 566 - -
Lan11g0948 839 ProSiteProfiles Protein kinase domain profile. 492 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0948 839 Pfam Protein kinase domain 496 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0948 839 Pfam PAN-like domain 343 405 IPR003609 -
Lan11g0948 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Lan11g0948 839 SMART serkin_6 492 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0948 839 Pfam S-locus glycoprotein domain 200 320 IPR000858 GO:0048544
Lan11g0948 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 55 205 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0948 Lan-Chr11 9708954 9711757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0948 482 780 Receptor kinase-like Gene Family AT5G20050 45.833 2.33e-78 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan11g0948 Pkinase 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0948 - - lja:Lj0g3v0252549.1 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0948 11 9708954 9711757 Lan1g2045 1 35560275 35563901 LSH