Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0944 ATGACAACTTTGGAGTGTGAGAGTCCAAAACATGAGAAAATGCACAAGAGCTTAAGTACACAGTTAGTTGTTGCTATAAGGAGTATTCAATGGAGCTATGGGATTTTTTGGGCATCTTCAACCACCCAAGAAGGAATACTGGAATGGAGAGATGGATACTATAATGGAGACATTAAGACAAGGAAAATAGTTCAAACCATGAATGAAATTAATGCTGATCAAATAGGAATGCAGAGGAGTGAACAACTGAAAGAACTATACAAGTTTCTTGTTATAGTTGAAGCTGATCCACAAACTAAAAGGCCTTCTGCTTCATTATCACCAGAGGATCTCTCTGATTCTGAGTGGTATTATTTGGTTTGCATGTCTTATGTATTCAATCCTAACCAAAGTTTACCTGGAAAAGCACTAGAAACTGGTGAAACTATTTGGTTATGCAATGCTCAACATGCAGATAATAATGTTTTCTCTCGTTCTTTGCTAGCAAAGACTGTGGTGTGTTTTCCCTATGTAGGAGGCGTTATTGAGATAGGAACAACTGAACTGCTGCAAGAAGATCCCAATCTCATTCAACATGTCAAGGCTTGTTTCTTAGAAATCTCAAAGCCTATATGTTCTGATAAATGTTCTTCTGACCTTAATAAACCAGAAATTGATGATAAATATCCAACATGCACCAATGGTGGTAACATGATATTAGATATAGTGACTTTAGAGAACTCATGTTCCTTTGCTGAAGAAACCAAATTTGATGAAGATATTGTCAAGGAACTGCAAGAAGATATAAATGAAGATTCTATCATGGATTCTCCTGATGGTTTTTCCAATGGTTGTGAGAACCATTTTTTGTTGGAGGAATCCATGGCTGAAGGAATCTATGATGGGCCTTCTCAAGTTCATCTTATTGATTATGACTTAAGCAATGATTCATTAGATTCCTTGAGTTCTTGTGATTCTATGCCAAAAGCTTCTGAGAACCAAGGCATAGTTTCTAAAAATGTGAGCCAAATTCATCTAAGGGAACTTGAAAGCAATGCTTCTGATGAAGACTTGTACTACACAAGAACTCTTTGTGCTGTTTTAGGAAATTCATCACATTTAACACAACCTAGTATCTCTAATTGTAAATCAAGTTTTGTGAAATGGAAGAAAGGAGTGATTTCTGAAAGGAAAAGGCCAAAGTTGGAACAAAGCATGTTAAAGAAGACTTTGTTTCTTTCTCCTTTTATGCATGGAAGTTTCTCCTCTCTCAACTCACAAAAAGAAAATGTCTTCTCTTCTAAAAGTAGAGAAAATACAAACTTTCAGGTTCTCAAATCTGTGGTCCCTTCTTCTACAAGTAAGGTGGACAAGATTTCAATCCTTGGAGAAACAATCAAATACTTAAAACAGCTTGAGGCAAGAGTGAAAGAACTTGAATCTTACATGGACATTGTAGATTCTGCAGCAAAAACCAAAAGAAAATGCCAAGATGTGCTAGAACAGATATCAGATAACTATGGTTCCAGAATGATTTACAAGGGAATGAAACCTTTGATGAAAAATATGAATGCTTGTGATATTCATGAGACAGACACAGAGATAGAAAGAGTTATCAATGAAGAAGCTAAGCCAATGAATGTGAAAGTAGACATAAAAGATGAAGAGGTTCTTATTGAGATGAAATGTATTTATAGAGAATACTTATTGCATGATATCATTGATGCCTTAAACAATCTCTATTTAGATGCTCACACAGTTGAATCATCAACAGTTGATGGTGTTCTCACATTTGCACTTAAAGCTAAGTTTCGCGGAGCAGCAACAGCGCCACCGAGGATGATCAAAGAAGCACTTTGGAAAGTGTCTGGAAATATTTGA 1860 0.3591 MTTLECESPKHEKMHKSLSTQLVVAIRSIQWSYGIFWASSTTQEGILEWRDGYYNGDIKTRKIVQTMNEINADQIGMQRSEQLKELYKFLVIVEADPQTKRPSASLSPEDLSDSEWYYLVCMSYVFNPNQSLPGKALETGETIWLCNAQHADNNVFSRSLLAKTVVCFPYVGGVIEIGTTELLQEDPNLIQHVKACFLEISKPICSDKCSSDLNKPEIDDKYPTCTNGGNMILDIVTLENSCSFAEETKFDEDIVKELQEDINEDSIMDSPDGFSNGCENHFLLEESMAEGIYDGPSQVHLIDYDLSNDSLDSLSSCDSMPKASENQGIVSKNVSQIHLRELESNASDEDLYYTRTLCAVLGNSSHLTQPSISNCKSSFVKWKKGVISERKRPKLEQSMLKKTLFLSPFMHGSFSSLNSQKENVFSSKSRENTNFQVLKSVVPSSTSKVDKISILGETIKYLKQLEARVKELESYMDIVDSAAKTKRKCQDVLEQISDNYGSRMIYKGMKPLMKNMNACDIHETDTEIERVINEEAKPMNVKVDIKDEEVLIEMKCIYREYLLHDIIDALNNLYLDAHTVESSTVDGVLTFALKAKFRGAATAPPRMIKEALWKVSGNI* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0944 619 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 415 465 IPR011598 GO:0046983
Lan11g0944 619 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 430 478 IPR036638 GO:0046983
Lan11g0944 619 Pfam Helix-loop-helix DNA-binding domain 432 466 IPR011598 GO:0046983
Lan11g0944 619 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 197 IPR025610 -
Lan11g0944 619 Gene3D - 428 499 IPR036638 GO:0046983
Lan11g0944 619 Coils Coil 462 482 - -
Lan11g0944 619 PANTHER TRANSCRIPTION FACTOR MYC1 11 617 - -
Lan11g0944 619 PANTHER TRANSCRIPTION FACTOR TT8 11 617 - -
Lan11g0944 619 SMART finulus 424 471 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0944 Lan-Chr11 9627899 9632910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0944 16 616 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 37.481 1.75e-116 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan11g0944 bHLH-MYC_N 4.5e-43 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0944 - - lang:109341268 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0944 11 9627899 9632910 Lan11g0944 11 9627899 9632910 ECH