Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0941 ATGGGGATTCAGTGCTCCACACTCATCCCATGTTGTTTGAATTCACAAGTCAAGGCTTCTGTTGTTGAAACTCCAGTTGCTGAAAATGAGGATAGAAGTGAGGTCAGTAACTCGCCTATATTTCGAGAATTTACACTTGAGCAGCTCAAGAATGCAACATCTGGTTTTGCTGTTGAGAATATTGTATCCGAGCATGGAGAGAAGGCTCCAAATGTTGTTTATAAAGGGAAGCTGGAGAATCAAATGAGGATTGCTGTTAAGCGGTTTAATAGAAATGCTTGGCCCGACTCTAGGCAGTTTTTGGAGGAAGCAAGATCAGTTGGTCAGCTCCGTAACCAAAGATTGGCAAATTTGCTTGGTTGTTGTTGTGAAGGAGATGAGAGGTTGCTTGTGGCAGAATACATGCCCAATGAAACACTTGCAAAACACCTTTTCCATTGGGAAGCACAGCCTATGAAATGGGCAATGCGACTAAGGGTTGTTCTACATCTTGCACAAGCTCTAGAGTACTGCACAAGCAAAGGGCGTGCCCTCTATCATGACCTTAATGCATATAGAATCTTATTTGATGAGGATGGTAATCCTAGGCTTTCGAGTTTTGGCCTTATGAAAAATAGTAGAGATGGGAAAAGTTATAGCACAAATTTGGCATTTACCCCTCCAGAATATCTCAGAACCGGGAGAGTCACACCAGAAAGCGTAATATATAGCTTTGGTACTCTTTTGCTTGATCTTCTCAGTGGGAAGCATATTCCTCCAAGTCATGCCCTTGATTTGATTCGGGATAGAAATCTTCAGATGCTGACAGATTCTTGTTTGGAAGGACAATTTTCTGATGATGATGGAACCGAGTTGGTACGCTTGGCTTCTCGATGTTTACAGTATGAACCTAGAGAACGGCCTAATTCAAAGTCATTGGTTGCTGCTTTGGCTCCTCTTCAAAAGGAAACAGAGGTTCCTTCACACGTCTTGATGGGTATCCCACATAGTGCCTCTTTTGCTTCATTATCTCCACTTGGTGAAGCATGCTCAAGAAAGGACTTGACTGCCATACATGAAGTTCTGGAAAGTCTTGGCTATAAAGATGATGAAGGGGTGACAAATGAGTTATCATTCCAGATGTGGACTGATCAAATGCAGGATACATTAAATTGTAAGAAAAGGGGGGATGCTGCTTTCCAGCAGAAAGAATTTAAACCGGCAATTGAGTGCTACACACAGTTCATTGATGCTGGAACAATGGTTTCTCCAACAGTCTATGCGCGGCGCAGTTTGTGTCACCTCATTAGTGACATGCCTCAGGAAGCACTCAATGATGCAATGCAAGCACAAGTCATTTCTCCTGTATGGCACATTGCATCTTATCTCCAATCTGTTGCCCTTGCTGGCCTTGGGATGGAGAATGAAGCACAAGCAGCACTGAAAGACGGAGCAACACTTGAAGCCAAGCGGATCGGAATGTCTAAACAAAAGTGA 1476 0.4322 MGIQCSTLIPCCLNSQVKASVVETPVAENEDRSEVSNSPIFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDSRQFLEEARSVGQLRNQRLANLLGCCCEGDERLLVAEYMPNETLAKHLFHWEAQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNSKSLVAALAPLQKETEVPSHVLMGIPHSASFASLSPLGEACSRKDLTAIHEVLESLGYKDDEGVTNELSFQMWTDQMQDTLNCKKRGDAAFQQKEFKPAIECYTQFIDAGTMVSPTVYARRSLCHLISDMPQEALNDAMQAQVISPVWHIASYLQSVALAGLGMENEAQAALKDGATLEAKRIGMSKQK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0941 491 PANTHER LRR RECEPTOR-LIKE KINASE 1 490 - -
Lan11g0941 491 SUPERFAMILY Protein kinase-like (PK-like) 32 319 IPR011009 -
Lan11g0941 491 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Lan11g0941 491 Gene3D Tetratricopeptide repeat domain 380 490 IPR011990 GO:0005515
Lan11g0941 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 IPR045845 GO:0004672|GO:0009742
Lan11g0941 491 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Lan11g0941 491 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Lan11g0941 491 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0941 491 SUPERFAMILY TPR-like 381 480 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0941 Lan-Chr11 9579302 9584674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0941 29 313 Glycoside Hydrolase AT3G07070 34.185 1.44e-44 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lan11g0941 PK_Tyr_Ser-Thr 1.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0941 K14500 - gmx:100781311 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0941 11 9579302 9584674 Lan11g0941 11 9579302 9584674 ECH
Lan11g0941 11 9579302 9584674 Lan9g0761 9 12351372 12359067 LSH