Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0937 ATGGATCGAGGGGATCAAATGGCGTTATCCGGTTCTGCATCTTACTATATGCAGAGAGGGATACCTGGTTCTGGACAACAACCTGAGTTACATAATTCACCTAATCTTCGTCCCATGCCGAATCCCAATTTACCATTTCAATCAAACATTGGGGGTCCAATGGAGTCTACAGGAATTTTATCTCAGACGGTAAATGTCGTTGCTCATTCCGGGGCTCCAACTGGGGAGAGTGTCAAAAGGAAGAGAGGAAGGCCTAGGAAATACGGAACTGGTGGAACTGTGTCACTGACATTGACTCCAAGTCCAATAACATCGGCTAGTCATCCTGGAACCTTGATACAAACACAAGGCCAAAAACGCGGTCGAGGGCGTCCACCTGGGTCTGGGAAGAAACAGCAGCTGGCTTCTCTTGGTGAATTGATGTCTGGTTCAGCTGGAATGGGTTTCACACCTCATATCGTCACCGTTGGAGTTGGAGAAGACATTGCAACAAAAATTATGGCATTTTCTCAGCAGGGCCCTAGAGCTATATGCATTTTGTCAGCCACTGGTGCTGTCTCTACGGTGACACTTCGTCAGTCTTCAACTTCAGGCGGCACTGTCACATATGAGGGGTGTTTCGAGATATTGTGTCTATCAGGCTCTTACTTGCTTACTGATGGTGGTGGCTCCCGCAATCGGACTGGTGGACTAAGTGTTTCCCTTGCCGGACCTGATGGTTGTGTCATTGGTGGAGGAATTGGCGGAGTGCTTATTGCTTCAAGTCAAGTTCAGGTGATAATTGGGAGCTTTATATCGGGTGGATTAAAGGCGAAGAAAATGAGAAAGGAAGCTTCAGAAATTGTTATGGTATCAGATCATCAGGCTGTTCATAATCCGGTTGTCGCGGTTAATAGCATTTCCTCAAATCAAAATTTTACTCCATCCTCATCTCCAAGCCCCTGGCCTGCATCGCGGCCATTGGATATGCGCAATTCGCATATTGACATTGATTTAATGCGTGGGTAA 1008 0.4683 MDRGDQMALSGSASYYMQRGIPGSGQQPELHNSPNLRPMPNPNLPFQSNIGGPMESTGILSQTVNVVAHSGAPTGESVKRKRGRPRKYGTGGTVSLTLTPSPITSASHPGTLIQTQGQKRGRGRPPGSGKKQQLASLGELMSGSAGMGFTPHIVTVGVGEDIATKIMAFSQQGPRAICILSATGAVSTVTLRQSSTSGGTVTYEGCFEILCLSGSYLLTDGGGSRNRTGGLSVSLAGPDGCVIGGGIGGVLIASSQVQVIIGSFISGGLKAKKMRKEASEIVMVSDHQAVHNPVVAVNSISSNQNFTPSSSPSPWPASRPLDMRNSHIDIDLMRG* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0937 335 MobiDBLite consensus disorder prediction 16 47 - -
Lan11g0937 335 SUPERFAMILY AF0104/ALDC/Ptd012-like 149 270 - -
Lan11g0937 335 Gene3D - 151 289 - -
Lan11g0937 335 MobiDBLite consensus disorder prediction 92 118 - -
Lan11g0937 335 SMART AT_hook_2 79 91 IPR017956 GO:0003677
Lan11g0937 335 SMART AT_hook_2 119 131 IPR017956 GO:0003677
Lan11g0937 335 MobiDBLite consensus disorder prediction 301 322 - -
Lan11g0937 335 CDD DUF296 150 264 IPR005175 -
Lan11g0937 335 Pfam Plants and Prokaryotes Conserved (PCC) domain 151 264 IPR005175 -
Lan11g0937 335 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 305 - -
Lan11g0937 335 MobiDBLite consensus disorder prediction 70 132 - -
Lan11g0937 335 ProSiteProfiles PPC domain profile profile. 145 288 IPR005175 -
Lan11g0937 335 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 305 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0937 Lan-Chr11 9515676 9521289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0937 1 335 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 50.670 3.70e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0937 - - gmx:100799791 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0937 11 9515676 9521289 Lan11g0937 11 9515676 9521289 ECH
Lan11g0937 11 9515676 9521289 Lan9g0762 9 12377507 12383832 LSH