Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0931 ATGGGAAGAGCACCATGTTGTGACAAGATGGGCTTAAAGAAAGGACCATGGACACCTGAAGAAGATGAGATTCTTGTTAATTTTATCAACAAGAATGGTGGTCATGGAAGCTGGCGTTCTCTTCCAAAGTTGGCAGGTCTTCTTCGTTGTGGTAAGAGTTGCAGGCTTAGGTGGACAAACTACCTTAGACCTGATATTAAACGTGGCCCTTTTACACTTGAGGAAGAAAAACTAGTCATACAGCTTCATGGTATCCTTGGAAATAGGTGGGCTGCAATATCATCTCAGCTACCGGGAAGAACAGACAATGAGATCAAGAATTTATGGAACACGCACTTAAAGAAACGTCTCATTAGAATGGGACTTGACCCTCAAACTCATTTGCCAATGGCCTATTCATGTTACCAACTTGGCAAGCCACTTGCATCATCCGTATCGACTCGTCACATGGCGCAGTGGGAAAGTGCAAGGCTCGAAGCTGAAGCTAGGCTCTCAAGGGAGTCATCTTTGTTCAACAATGATCCTAACTCATTTGTTGATGCCAACAACAAAACTGATTCGGACTATTTTCTCCGGATATGGAACTCTGAAGTTGGAGAATCGTTTCGAAGCGCACGTAAATTTGATGACATAACTAGTCCAATTTCTTCAGGATCATCTTCAAACAAATGTGGTTCAGTGTCTGCTATTACAACAGAGTTAGCAAGCAATGTGAAAGATGATTTGGAGTGGAGAAACTCTGATTCAGCAAGCTCTAATGACTTGGAAGACTCATCTGATACTGCATTGCAGCTCTTATTAGATTTTCCTATAAACAATGATATGAGCTTCTTAGAAGAAAGCTCTTTTATTTCCCCTCTTTAG 864 0.4167 MGRAPCCDKMGLKKGPWTPEEDEILVNFINKNGGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFTLEEEKLVIQLHGILGNRWAAISSQLPGRTDNEIKNLWNTHLKKRLIRMGLDPQTHLPMAYSCYQLGKPLASSVSTRHMAQWESARLEAEARLSRESSLFNNDPNSFVDANNKTDSDYFLRIWNSEVGESFRSARKFDDITSPISSGSSSNKCGSVSAITTELASNVKDDLEWRNSDSASSNDLEDSSDTALQLLLDFPINNDMSFLEESSFISPL* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0931 287 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lan11g0931 287 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 220 - -
Lan11g0931 287 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 246 281 - -
Lan11g0931 287 SUPERFAMILY Homeodomain-like 10 109 IPR009057 -
Lan11g0931 287 SMART sant 13 64 IPR001005 -
Lan11g0931 287 SMART sant 67 115 IPR001005 -
Lan11g0931 287 CDD SANT 16 62 IPR001005 -
Lan11g0931 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Lan11g0931 287 Gene3D - 70 117 - -
Lan11g0931 287 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lan11g0931 287 CDD SANT 70 113 IPR001005 -
Lan11g0931 287 PANTHER PROTEIN ODORANT1-LIKE 1 220 - -
Lan11g0931 287 PANTHER PROTEIN ODORANT1-LIKE 246 281 - -
Lan11g0931 287 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lan11g0931 287 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Lan11g0931 287 Gene3D - 11 68 - -
Lan11g0931 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0931 Lan-Chr11 9460475 9463843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0931 1 280 MYB Transcription Factor Family AT3G61250 67.247 1.18e-127 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan11g0931 Myb_DNA-binding 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0931 K09422 - gmx:100816569 421.009