Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0909 ATGAGTTTTGGAGGGTTTTTAGACAACAGTGGTGGTGTGAGAAACTTATCAGATATTGCATATAACAACGGTACCACTACAGATAACAACTACAACAATAGAATAATGCCCTCTAGTGCAATCTCACACCCTCCCTTCATGACTTCAACTTTGGCCAAATCCATGTTCAACTCTCCAGGGTTGTCTCTTGCACTTCAAACTAATATAGATGGGCAAGGAGATCAACATGTGAATAGATCGATGGGTGAGAATAATAATAGTAATAATAATTTTGAGGTGAATGGTTTGAGAAGGAGCAGAGAAGAACATGAAAGTAGATCTGGTAGTGATAACATGGATGGTGTTTCTGGTGATGAACAAGATGCTGCCGACAAACCTCCAAGGAAAAAACGTTATCACCGACACACTCCTCAGCAAATACAAGAACTTGAATCGTTGTTTAAGGAGTGTCCACACCCAGATGAGAAGCAAAGACTAGAACTAAGCAAAAGGCTATGCTTGGAAACCAGGCAAGTGAAGTTTTGGTTCCAAAATCGAAGAACCCAAATGAAGACACAATTGGAGCGCCATGAGAATTCACTGCTTAGGCAAGAGAATGATAAGCTTAGAGCTGAGAACATGTCAATTAGGGAAGCTATGAGGAACCCAATGTGTTCAAATTGTGGGGGACCAGCTATTATTGGTGACATTTCAGTAGAGGAACAACATCTTTGGATTGAGAATGCAAGGTTGAAAGATGAACTAGACCGCGCTTGTGTGCTCGCTGGCAAGTTTTTAGGCCGACCCATATCGACAAACTCGATTGCTCCTCAATTGCCAAATTCAAGTTTAGAACTTGGAGTTGGTAGCAATAGTAATGGCTTTGGTGGAATGAGCACTGTGCCTTCAGCATTACCTTCCGGGTCGGATTTCGGAATCGGGGGCATGTCTAGTCCTTTAGCCATAGTGTCTCATTCCACTAGACCAACACCGGGCGCTATGGTTAGCGGCTTTGATAGATCAATGGAGAGGTCTATGTTATTGGAGCTTGCTTTGTCTGCAATGGATGAGTTGGTGAAGTTGGCACAAACTGGTGAGCCTCTTTGGATAAGGAGTTTAGAAGGAGGGAGGGAAATTCTGAACAATGAGGAATACTTAAGGACATTCACCCCTTGCATTGGCTTAAGACCCAATGGTTTTGTGTCTGAGGCTTCTAGAGAGAGTGGAATGGTCATCATAAACAGCTTGGCCCTTGTTGAGACTCTAATGGATGCGAATCGATGGGCAGAGATGTTTTCTTCTATGATTGCTACAACCTCTACTACTGAAGTGATATCTAATGGAATTAATGGAACCAGAAATGGTGCACTTCAACTAATGAATGCTGAGCTTCAAGTTCTATCACCTTTGGTTCCGGTCCGTGAGGTGAATTTCCTCCGGTTTTGCAAGCAGCACGCCGAAGGCGTATGGGCTGTGGTGGATGTGTCCGTAGACACCATCCGCGAAACTTCCGGTGCACCGACTTTTCCGAACTGTAGGAGGCTTCCTTCCGGTTGTGTTGTGCAAGATATGCCTAATGGTTACTCCAAGGTGACATGGGTGGAACATGCAGAATACGAGGAAAGCCAGGTCCACCAGCTCTACCGGTCCTTGTTGAGCTCAGGCATGGGCTTCGGCGCTCAACGCTGGGTCGCCACCCTACAACGCCAATCCGAGTGCCTCGCCATCCTTATGTCCTCCGCGACACTCGCCCGAGACCACTCAGCTATAACTGCGGGTGGAAGACGTAGCATGCTGAAGTTAGCACAACGCATGACAAACAACTTCTGTGCTGGAGTTTGCGCATCAACGGTTCACAAATGGAACAAACTGAACCCTGGGAACGTAGACGAGGACGTGAGAGTCATGACACGGAAGAGTGTCGACGATCCCGGTGAGCCACCGGGTGTCGTGCTGAGCGCCGCCACTTCTGTGTGGCTTCCTGTTTCATCTCAGAGACTATTCGATTTCTTACGTGATGAGAGGCTTAGAAGCGAGTGGGATATCCTCTCCAATGGTGGTCCTATGCAGGAAATGGCTCACATCGCTAAAGGTCAAGATCATGGCAATTGCGTTTCTCTCCTACGAGCCAGCGCTATGAATTCTAACCAGAGCAGCATGCTGATACTTCAAGAGACATCCATAGACGCAGCTGGGTCGCTTGTGGTTTACGCGCCGGTTGATATTCCAGCCATGCACGTTGTCATGAACGGCGGTGACTCAGCTTACGTGGCATTGCTACCGTCAGGGTTTGCCATTGTACCTGACGGGCCGCATAACGGTGGAGCCAATGACAGTAATAACGGTGGTGAGAACCGTGTAAGTGGGTCCCTTCTAACGGTGGCGTTTCAAATCCTTGTGAATAGTCTCCCTACGGCCAAGCTCACCGTAGAATCAGTGGAGACTGTAAACAACTTAATCTCGTGCACCGTTCAGAAGATCAAAGCTGCGCTTCATTGTGAAAGTTAA 2487 0.4713 MSFGGFLDNSGGVRNLSDIAYNNGTTTDNNYNNRIMPSSAISHPPFMTSTLAKSMFNSPGLSLALQTNIDGQGDQHVNRSMGENNNSNNNFEVNGLRRSREEHESRSGSDNMDGVSGDEQDAADKPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIREAMRNPMCSNCGGPAIIGDISVEEQHLWIENARLKDELDRACVLAGKFLGRPISTNSIAPQLPNSSLELGVGSNSNGFGGMSTVPSALPSGSDFGIGGMSSPLAIVSHSTRPTPGAMVSGFDRSMERSMLLELALSAMDELVKLAQTGEPLWIRSLEGGREILNNEEYLRTFTPCIGLRPNGFVSEASRESGMVIINSLALVETLMDANRWAEMFSSMIATTSTTEVISNGINGTRNGALQLMNAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDTIRETSGAPTFPNCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRSLLSSGMGFGAQRWVATLQRQSECLAILMSSATLARDHSAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNPGNVDEDVRVMTRKSVDDPGEPPGVVLSAATSVWLPVSSQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETSIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPHNGGANDSNNGGENRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0909 828 SMART START_1 342 566 IPR002913 GO:0008289
Lan11g0909 828 ProSiteProfiles 'Homeobox' domain profile. 126 186 IPR001356 GO:0003677
Lan11g0909 828 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 90 825 IPR042160 -
Lan11g0909 828 ProSiteProfiles START domain profile. 333 569 IPR002913 GO:0008289
Lan11g0909 828 Gene3D - 115 202 - -
Lan11g0909 828 SUPERFAMILY Homeodomain-like 112 186 IPR009057 -
Lan11g0909 828 ProSitePatterns 'Homeobox' domain signature. 161 184 IPR017970 GO:0000981|GO:0006355
Lan11g0909 828 CDD START_ArGLABRA2_like 337 565 - -
Lan11g0909 828 Pfam START domain 342 565 IPR002913 GO:0008289
Lan11g0909 828 SUPERFAMILY Bet v1-like 594 821 - -
Lan11g0909 828 Coils Coil 180 215 - -
Lan11g0909 828 MobiDBLite consensus disorder prediction 72 136 - -
Lan11g0909 828 MobiDBLite consensus disorder prediction 95 109 - -
Lan11g0909 828 MobiDBLite consensus disorder prediction 72 94 - -
Lan11g0909 828 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 90 825 - -
Lan11g0909 828 CDD homeodomain 128 186 IPR001356 GO:0003677
Lan11g0909 828 Pfam Homeodomain 129 184 IPR001356 GO:0003677
Lan11g0909 828 Gene3D - 408 564 IPR023393 -
Lan11g0909 828 SUPERFAMILY Bet v1-like 334 566 - -
Lan11g0909 828 SMART HOX_1 127 190 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0909 Lan-Chr11 9199618 9205497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0909 1 828 Homeobox Transcription Factor Family AT3G61150 64.573 0.0 1027
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan11g0909 START 2.7e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0909 K09338 - gmx:100787537 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0909 11 9199618 9205497 Lan11g0909 11 9199618 9205497 ECH