Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0891 ATGTCAACCAAATCCTTTCGACACGAAATTGATCTTAGTCTCGGCGAACCTATGGGCCCAAAAGAAGAGCCCGAAACGGAGGCGGCAATACGGGTGATGCCCACGGAGATGCCCATGCAAGTTAATAAGGCCTTAGTCCAAGTCCAACCAACTCAAAAGAGATCCTCCACGAAGGACCGCCACACCAAAGTCGAGGGTCGAGGCAGGAGGATCCGTATGCCTGCCACGTGCGCGGCCAGGATCTTTCAATTAACACGAGAACTCGGGCACAAGTCTGACGGAGAAACAATCCGGTGGCTCCTCGAACACGCCGAGCCTGCCATCATCGCCGCCACCGGTACCGGCACCGTTCCCGCCATCGCCATGTCGGTCAACGGCACTCTCAAAATCCCAACCACCACCCATTCTTCTGCTATAGCCAGCTCCGACCCGGAACCCGGTGACCCGCAAGAGAAAAAGAAACGTAAACGACCCGCGAACAGTGCTTATGTGGACATAAACGACGGCGTCGTTTCAGTCTCAGCCGGTTTAACAACTTCATCACACGCAAACACAGCAATTCCGTTACAAAACGCGATTCCGTTACCACAAGGTATGGTTCCCGTGTGGGCCATACCTTCAAACGCTGTCGTTCCAGCTGCGGGAGCGTTCTTCGTTGTTCCTTCTCCCATGGCTGCAGGACCTTCGAACCAGCCACAGTTCTTCACACTAGCTCGTCCAATCTCAGCTTTCGTTTCCTCCATGGTACCAACCCCTGTTCAACTCCAACAACATCCAACGTCAACGAACACGTGTTCTGCTTCTCCGTCTTCGAAATCGCCGCCAATCGCGACGGCCATGGCTCCGACAACCACCGCCACCACAACGACGCAGATGCTGAGAGATTTCTCGTTGGAGATTTACGATAAGCAAGAGCTTCAGTTCATGTCACGTTCCTCCTCAAAGCAATGA 951 0.5384 MSTKSFRHEIDLSLGEPMGPKEEPETEAAIRVMPTEMPMQVNKALVQVQPTQKRSSTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTHSSAIASSDPEPGDPQEKKKRKRPANSAYVDINDGVVSVSAGLTTSSHANTAIPLQNAIPLPQGMVPVWAIPSNAVVPAAGAFFVVPSPMAAGPSNQPQFFTLARPISAFVSSMVPTPVQLQQHPTSTNTCSASPSSKSPPIATAMAPTTTATTTTQMLRDFSLEIYDKQELQFMSRSSSKQ* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0891 316 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 314 IPR005333 GO:0003700
Lan11g0891 316 MobiDBLite consensus disorder prediction 255 276 - -
Lan11g0891 316 Pfam TCP family transcription factor 56 150 IPR017887 -
Lan11g0891 316 PANTHER TRANSCRIPTION FACTOR TCP9 18 314 - -
Lan11g0891 316 MobiDBLite consensus disorder prediction 1 25 - -
Lan11g0891 316 MobiDBLite consensus disorder prediction 134 160 - -
Lan11g0891 316 MobiDBLite consensus disorder prediction 47 67 - -
Lan11g0891 316 ProSiteProfiles TCP domain profile. 57 111 IPR017887 -
Lan11g0891 316 MobiDBLite consensus disorder prediction 146 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0891 Lan-Chr11 8935167 8936408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0891 50 315 TCP Transcription Factor Family AT2G45680 56.122 1.24e-88 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan11g0891 TCP 4.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0891 - - pvu:PHAVU_010G089100g 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0891 11 8935167 8936408 Lan11g0891 11 8935167 8936408 ECH