Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0890 ATGGACCAAAACCATGGATCTTCATCTCCATACAATTATCCAAATCCATATTACCCTCAAAACCCTCATCCTAACCAATATGGTCATGATCCATATGCTAACCCTCCTCAACAATATCCATACAACCCTTCACCACATTCCTTCAATTATCCCTACCCTCCACCACCTCAACCATGCTTTACAACCCCACATTCCGGCCCTATAAATTATCACTACCCTCCACCTCCTCCACCACCTTCCTCAGCCCCTAATACTGCCTCATTCGACTTTAACCGACCGCCTCCATCATCAGACTTTTTCGGCCCCCAGCCACCTCATCCTTATCCTTACCCCTACCAAGCTCTTCCAGAGAGTCATGGTCATCCTCAGCCTCAGCCTCAGCCGCCCTTTTCAGAGTATGGATCATCATCACCTTACAATTACCAACAGAATGAGGCCTATTCACAGTCTGGACACTACTCACACGCGCATAGCGGCTTCGCTGGTCCCTACCAGCAGGAGAACATGAGCTCTGTGGGCTATTCCAATCCTTCTCAGGGATCTGCTTACCCGCCTTTGCATGATCTTATGAGCAATGTTCGGTTATCGGACAATAACCAGCCAACTGCTCCTGCATCGCCCCCGGCCCCTGCTGCGCACCCATTGCTACATTCTAATTCAGTTATGAAGGAAGAGAAACCATGGGGGCATTCCAATTCAGTTCCGACAGAAGAGAGGAACCATGACTACCTATTGCAACATTCCAATTCAGTTACAAAGGAAGAGAAACCATGGGGGCATTCCAATTCAGTTCCAACAGAAGAGAGGAACCATGACTACCCATTGCAACATTCCAATTCAGTTACAAAGGAAGAGAAACCATGGGGGCATTCCAACTCAGTTCCAACAGAAGAGAGGAACCATGACTTTTATGGTTATTCTAATAGCTCCTTCTCAGGATGGGGATCCTCCCCTCACTCTGATCCGGGGAATTCTCCAAATCTTTCAGATTATTCTGGTTCATTTAATGACTCGGTGCATAGTCAGAGTTTGCAGATTGTTCCAATTCAAAATAATGTGGCGTCTTTAAGAGTTTTGCTCCTACATGGAAATTTAGATATATGGGTTCATGGAGCCAAAAATCTTCCAAATATGGACATGTTCCACAAAACTTTGGGGGAAATGTTTGGTAGAAAACCTGCTAATTCCAGCACTAAAGTAGAAGGAACAGTGAGTCATAAGATTACTAGTGATCCTTATGTAACAGTTTCTATATCAAATGCTGTAATTGGGAGGACTTTTGTTATTAGCAACAATGAAAACCCTGTCTGGGAGCAACATTTCTACGTTAATGTTGCACATTATGCTGCTGAATTGCACTTTGTTGTCAAGGACAGTGATGTTGTGGGTTCACAGATTATTGGTGTTGTGGCAATTCCAGTGGAACAAATATACTCTGGGGAAAGAGTAGAAGGGACCTACCCTATCCTGAACAATAACGGTAAGCCTTGTAAGCCGGGTGCTGTCTTGAGTCTATCCATTCAGTACATTCCCATGGAGAAACTGATCATTTATCATCAAGGAGTCGGAGCAGGGCCTGAATATATTGGGGTTCCGGGCACATATTTCCCATTGAGGAAAGGTGGAACTGTTACTCTCTATCAAGATGCCCATGTTCCAGATGGCTGCCTCCCTGATGTGATGCTTGATAATGGGATGCATTATGTTCATGGAAAATGCTGGGTTGACATCTTTGATGCCATACAAGAAGCTCGGCGTTTGATTTATATTACTGGTTGGTCAGTGTGGCACAGAGTCAGGTTGCTTAGGGATACCCGTAATGCATCAGATTCCACCCTAGGTGAACTTTTGAGGATCAGGTCACAAGAAGGAGTAAGAGTACTTCTCCTTGTTTGGGATGACCCTACATCAAGAAGCATTCTTGGTTATAGAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTCGCCGATTTTTCAAGCATTCTTCTGTGCAAGTTCTGCTTTGTCCTCGTGTGGCTGCAAAACGACATAGCTGGGTCAAGCAACAGGAGGTTGGAACAATATATACACACCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATAACAAAAGAAAAATTGTAGCATTTGTTGGTGGGCTTGATTTGTGTGACGGGCGATATGATACTCCTCACCATCCTCTCTTCAGGACATTGCAGACACTGCATACGGATGATTATCACAACCCTACTTTCACGGGTAATGTTGGTGGCTGTCCACGGGAGCCATGGCATGACTTGCATTCTAAAGTTGATGGTCCAGCGGCTTACGATGTTTTGACCAACTTTGAGGAACGCTGGTTAAAAGCTTCAAAACTTCAAGGGGGGATAAAGAAGTTGAAAAGTTCATTTGATGATGCATTACTTAGGATAGAAAGAATTCCAGATATTCTCAAAGTGTTTGATGCTCCTAGTGTTGGTGATGATAATCCTGAAGCTTGGCATGGTCAGATATTTCGTTCAATTGATTCAGGTTCTGTTAAGGGGTTTCCAAAGGATCCCAAAGATGCATCAATCAAGAACCTAGCATGTGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCAATTCGTGCTGCACAACATTACATTTATATAGAGAATCAATATTTCATTGGGTCTTCATTCAATTGGAGTCAGCATAAAGACCTTGGTGCTAATAATTTAATTCCAATGGAAATTGCGCTTAAGATTGCTGAAAAGATAAGGGCAAATGAGAGGTTTGCAGTTTATATCGTTATTCCAATGTGGCCTGAGGGTGTTCCAACAGGGGCTGCCACCCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTACGAGACGGTTTACAAGGCTTTGGTGGAAGTTGGGCTTGAAGCAGCATACTCTCCGCAAGACTATTTGAACTTTTTCTGTCTTGGAAATCGGGAGGCCATAGATATCTATGAGAATATTGCTGTGTCTGGAAATCCTCCCCCAGCAAATAGTCCACAAGCAACTAGTCGGAACAACCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGATCTGCTAACATCAACCAGCGCTCTATGGAAGGAACAAGGGACACCGAGATTGCAATGGGAACCTACCAACCTCATCATACCTGGGCAAGAAAACAGTCTTATCCACATGGACAGATTCATGGATTTAGGATGTCGCTTTGGGCGGAACACACGGGTACAATTGAAGAGTGCTTCTTGCAACCGGAGAGTCTGGAATGTGTGAGAAGGGTTAGAACAATGGCTGAACTGAACTGGAAACAATTTTCAGCAAATGAGATAACAGAGATGAGAGGGCATCTACTCAAATACCCGGTGGAAGTTGATCGAAAAGGTAAAGTTAAACCCCTTCCTGGCCATGAAGAGTTCCCTGATGTCGGAGGAAGGATAGTTGGGTCATTTATCGCCATTCAGGAGAATCTAACCATATGA 3537 0.4377 MDQNHGSSSPYNYPNPYYPQNPHPNQYGHDPYANPPQQYPYNPSPHSFNYPYPPPPQPCFTTPHSGPINYHYPPPPPPPSSAPNTASFDFNRPPPSSDFFGPQPPHPYPYPYQALPESHGHPQPQPQPPFSEYGSSSPYNYQQNEAYSQSGHYSHAHSGFAGPYQQENMSSVGYSNPSQGSAYPPLHDLMSNVRLSDNNQPTAPASPPAPAAHPLLHSNSVMKEEKPWGHSNSVPTEERNHDYLLQHSNSVTKEEKPWGHSNSVPTEERNHDYPLQHSNSVTKEEKPWGHSNSVPTEERNHDFYGYSNSSFSGWGSSPHSDPGNSPNLSDYSGSFNDSVHSQSLQIVPIQNNVASLRVLLLHGNLDIWVHGAKNLPNMDMFHKTLGEMFGRKPANSSTKVEGTVSHKITSDPYVTVSISNAVIGRTFVISNNENPVWEQHFYVNVAHYAAELHFVVKDSDVVGSQIIGVVAIPVEQIYSGERVEGTYPILNNNGKPCKPGAVLSLSIQYIPMEKLIIYHQGVGAGPEYIGVPGTYFPLRKGGTVTLYQDAHVPDGCLPDVMLDNGMHYVHGKCWVDIFDAIQEARRLIYITGWSVWHRVRLLRDTRNASDSTLGELLRIRSQEGVRVLLLVWDDPTSRSILGYRTDGVMATHDEETRRFFKHSSVQVLLCPRVAAKRHSWVKQQEVGTIYTHHQKTVIVDADAGNNKRKIVAFVGGLDLCDGRYDTPHHPLFRTLQTLHTDDYHNPTFTGNVGGCPREPWHDLHSKVDGPAAYDVLTNFEERWLKASKLQGGIKKLKSSFDDALLRIERIPDILKVFDAPSVGDDNPEAWHGQIFRSIDSGSVKGFPKDPKDASIKNLACGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWSQHKDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETVYKALVEVGLEAAYSPQDYLNFFCLGNREAIDIYENIAVSGNPPPANSPQATSRNNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGTYQPHHTWARKQSYPHGQIHGFRMSLWAEHTGTIEECFLQPESLECVRRVRTMAELNWKQFSANEITEMRGHLLKYPVEVDRKGKVKPLPGHEEFPDVGGRIVGSFIAIQENLTI* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0890 1178 PANTHER PHOSPHOLIPASE D 269 1178 IPR015679 -
Lan11g0890 1178 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1024 1051 IPR001736 GO:0003824
Lan11g0890 1178 ProSiteProfiles C2 domain profile. 345 487 IPR000008 -
Lan11g0890 1178 SUPERFAMILY beta-sandwich domain of Sec23/24 95 1128 - -
Lan11g0890 1178 Gene3D Endonuclease Chain A 567 803 - -
Lan11g0890 1178 MobiDBLite consensus disorder prediction 1 215 - -
Lan11g0890 1178 PANTHER PHOSPHOLIPASE D ALPHA 1 269 1178 - -
Lan11g0890 1178 MobiDBLite consensus disorder prediction 314 334 - -
Lan11g0890 1178 SUPERFAMILY Phospholipase D/nuclease 857 1110 - -
Lan11g0890 1178 MobiDBLite consensus disorder prediction 132 182 - -
Lan11g0890 1178 SMART C2_3c 364 486 IPR000008 -
Lan11g0890 1178 Pfam C2 domain 363 489 IPR000008 -
Lan11g0890 1178 Pfam Phospholipase D C terminal 1098 1168 IPR024632 -
Lan11g0890 1178 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 688 723 IPR001736 GO:0003824
Lan11g0890 1178 MobiDBLite consensus disorder prediction 275 289 - -
Lan11g0890 1178 MobiDBLite consensus disorder prediction 97 112 - -
Lan11g0890 1178 MobiDBLite consensus disorder prediction 248 302 - -
Lan11g0890 1178 MobiDBLite consensus disorder prediction 36 83 - -
Lan11g0890 1178 SUPERFAMILY Phospholipase D/nuclease 559 787 - -
Lan11g0890 1178 Gene3D Endonuclease Chain A 846 1081 - -
Lan11g0890 1178 MobiDBLite consensus disorder prediction 260 274 - -
Lan11g0890 1178 CDD C2_plant_PLD 358 510 - -
Lan11g0890 1178 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 356 512 IPR035892 -
Lan11g0890 1178 SMART pld_4 1024 1051 IPR001736 GO:0003824
Lan11g0890 1178 SMART pld_4 688 723 IPR001736 GO:0003824
Lan11g0890 1178 Gene3D C2 domain 358 497 IPR035892 -
Lan11g0890 1178 Pfam Phospholipase D Active site motif 1025 1051 IPR001736 GO:0003824
Lan11g0890 1178 Pfam Phospholipase D Active site motif 689 723 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0890 Lan-Chr11 8906475 8914167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0890 297 1178 Phospholipase D Gene Family (Wang group) AT2G42010 75.110 0.0 1417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0890 K01115 - gmx:100801286 1574.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0890 11 8906475 8914167 Lan11g0890 11 8906475 8914167 ECH