Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0887 ATGAATACTTTATCATTAAGCTCAAACCTAAGCATTTCCAAACCATTATTTCACTGTCTTCCATTCTCAAACAAACAACATAAACCTTCTTCACACATGAAGTTTGTTGTTGTTTCATGCATAGCCACAAAGGTGAAAAGTAATGAAACAAACTTGTACAACATACTTTCATTGAGTCCAAAAAGTGCAACAATGGATGATATAAAGAGATCTTATAGATCAATGGCTCTTCAATACCACCCAGATGTGTGTCATGACCCTTCATTGAAAGAGGAGCGTACTAGGATGTTTGTGAAGGTAAATGCAGCTTATGAGACATTGTCAAATCCTATGCTTAGAGCAGAATATGATTGCGAGTTGGGTTTGAAAAGTAGAATAATGAGCAATGTTGGTGTTAGTGAAGATGAGAAATGGAGTAGAAGGTGGCAAGAACAAGTTGGTGGGTTGAAAATGAGGTCTCGTACACGTATGGGACAAAAGGGAGGGTCATGGGGCAATAGAATGAGGACACAAAATATGAAAAATCAGAGTTGA 534 0.3745 MNTLSLSSNLSISKPLFHCLPFSNKQHKPSSHMKFVVVSCIATKVKSNETNLYNILSLSPKSATMDDIKRSYRSMALQYHPDVCHDPSLKEERTRMFVKVNAAYETLSNPMLRAEYDCELGLKSRIMSNVGVSEDEKWSRRWQEQVGGLKMRSRTRMGQKGGSWGNRMRTQNMKNQS* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0887 177 PRINTS DnaJ domain signature 54 72 IPR001623 -
Lan11g0887 177 PRINTS DnaJ domain signature 72 87 IPR001623 -
Lan11g0887 177 PRINTS DnaJ domain signature 92 112 IPR001623 -
Lan11g0887 177 SMART dnaj_3 50 112 IPR001623 -
Lan11g0887 177 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 3 176 - -
Lan11g0887 177 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 176 - -
Lan11g0887 177 SUPERFAMILY Chaperone J-domain 37 119 IPR036869 -
Lan11g0887 177 CDD DnaJ 51 109 IPR001623 -
Lan11g0887 177 ProSiteProfiles dnaJ domain profile. 51 120 IPR001623 -
Lan11g0887 177 MobiDBLite consensus disorder prediction 149 177 - -
Lan11g0887 177 Pfam DnaJ domain 51 117 IPR001623 -
Lan11g0887 177 Gene3D DnaJ domain 37 144 IPR036869 -
Lan11g0887 177 ProSitePatterns Nt-dnaJ domain signature. 97 116 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0887 Lan-Chr11 8880796 8881434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0887 41 117 C2H2 Transcription Factor Family AT1G74250 40.506 1.32e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0887 - - gmx:100811478 208.764