Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0876 ATGGCAAGTGGCAAGCTTTTTGGGGGTCCAAATATGACAGTTCTGCACCAAAATGAAAGACTTCCTTGCTCTTCTGAACTTCTTGAGTCTCTTTGGATTCATAACTCTGACCCTGCTTCTTTCCAAGGTTCAAAACAAGTGGTTGATTTTGAGAATGTTAGTGGCAGAGACAGACCCTTCTTCCAAGCACTTGACAAGGAAGAAAACTGTGATGAGGACTATGACACATGCTTTCATCAACCTGGTAAGAAAAGGAGGCTCACAAGTGAACAAGTTCAGTTTCTTGAAAGGAACTTTGAGGTAGAAAACAAGCTTGAACCTGAAAGAAAGGTTCAACTTGCAAAAGAGCTTGGCTTGCAGCCAAGACAAGTGGCTATATGGTTTCAAAACAGAAGGGCAAGGTTCAAGACCAAACAACTTGAAAAAGAGTATGGCACATTGAAAGCTAGCTTTGATAGACTCAAAGGTGACTATGAAAATCTTCTTCAAGAAAACCAGAAGTTAAAAGATGAGGTGAATTCACTGAAGAACAAATTGATTCCAAGAGATAAAGAAAAAGAGAATTCAGATGACAAGTCATTCTCCAATGGTGCTGTCAACTCACTCCTCCACCAAGAGGAGCCTATTATGGATTTAATATCATCAAATGCAACATCTGAAAATGGGTCCAAGGTGCCACTCCCTATTATGGTAACATGCAAAATAGAAGATGCTAATTCAGCAAAAAGTGATGTTCTTGATTCTGATAGCCCACATTGCATTGAGGATAGGAACAATAACCCTTCCTCATTTGTTATGGATCCTGCTACTGATTCCTCTCATGCTTTTGAACCAGATCACTCAGATTTCTCACAAGATGATGATGAGGATGATCTTAGTGAAAAACTTTTGACCCTTCCTTGTTTACCAAAGGTTGAAGATGCTTGTTATGATCATAATCCTGAAAACTCTTGTAACTTTGGGTTCCCAGTTGAAGATCAAACCTTTTGTTTCTGGCCTTACTGA 1005 0.394 MASGKLFGGPNMTVLHQNERLPCSSELLESLWIHNSDPASFQGSKQVVDFENVSGRDRPFFQALDKEENCDEDYDTCFHQPGKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKEYGTLKASFDRLKGDYENLLQENQKLKDEVNSLKNKLIPRDKEKENSDDKSFSNGAVNSLLHQEEPIMDLISSNATSENGSKVPLPIMVTCKIEDANSAKSDVLDSDSPHCIEDRNNNPSSFVMDPATDSSHAFEPDHSDFSQDDDEDDLSEKLLTLPCLPKVEDACYDHNPENSCNFGFPVEDQTFCFWPY* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0876 334 Pfam Homeobox associated leucine zipper 138 179 IPR003106 GO:0006355|GO:0043565
Lan11g0876 334 Pfam Homeodomain 83 136 IPR001356 GO:0003677
Lan11g0876 334 SUPERFAMILY Homeodomain-like 72 140 IPR009057 -
Lan11g0876 334 MobiDBLite consensus disorder prediction 242 290 - -
Lan11g0876 334 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 334 IPR045224 GO:0003700
Lan11g0876 334 ProSiteProfiles 'Homeobox' domain profile. 78 138 IPR001356 GO:0003677
Lan11g0876 334 PANTHER HOMEOBOX LEUCINE ZIPPER FAMILY PROTEIN 1 334 - -
Lan11g0876 334 MobiDBLite consensus disorder prediction 255 269 - -
Lan11g0876 334 CDD homeodomain 81 139 IPR001356 GO:0003677
Lan11g0876 334 SMART HOX_1 80 142 IPR001356 GO:0003677
Lan11g0876 334 Coils Coil 151 178 - -
Lan11g0876 334 PRINTS Lambda-repressor HTH signature 109 118 IPR000047 GO:0003677
Lan11g0876 334 PRINTS Lambda-repressor HTH signature 118 134 IPR000047 GO:0003677
Lan11g0876 334 Gene3D - 76 145 - -
Lan11g0876 334 ProSitePatterns 'Homeobox' domain signature. 113 136 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0876 Lan-Chr11 8687494 8689959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0876 43 179 Homeobox Transcription Factor Family AT3G01470 54.745 1.12e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan11g0876 Homeodomain 4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0876 - K09338 adu:107489132 414.461