Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0865 ATGGATTCTGCGATAACCGTCACCACGACGGCGCAGATGGCGCTTCTCAAGGCTCTCCACCGTCATTTCACCGCTCCTCCTCACACCATCCTTCTCCGACGCAACCTTAATCACGCTCTTACTTCTTACAACCGTTGCCACCGCGTTTCCGCCTCTTTTGCTTCTGCTCCGCCGTCACGCTCACTTTGCTTTTTCGGTTCACTGTTCCGCCCAACGCCGTTCCATTTGCGGTGCGTTTCAAGCTCAGCTGCTTCATTTGCTTCTTCCGCCGGCGGAGGAAATGACGGTGCCGGAGCCGGCGTAGGAGGTGGTGGTTCTGGTGGTGAGTTTGGAGATGGTAACCTGAAATTGGTTGTAGACGCGGTGGCTCAGGATCTTTCGGTACTTTCGACTGATGTTATTATTCTCGATGTTTCGGGAATGGCATGTGGTGGATGCGCTGCAAATGTGAAAAGGATTCTGGAAAGCCAACCACAAGTGTCATCGGCTAGTGTAAATCTAACAACAGAGACAGCAATAGTTTGGCCTGTATCTGAAGCAAAGACTGAACCAAATTGGCAAAAGCAATTAGGGGAGGCACTCGCAGAGCATTTAACTGGCTGTGGTTTTAATTCTAGCCTTCGAGATTCAGTGGGAGACAATTTCCTCCAAATTTTTCAAAGGAAGATTGAGGAAAAGCGTAAACAATTAAGAGAAAGTGGTCGCGAGCTAGCTGTTTCTTGGGCCCTATGTGCTGTCTGTCTTGTTGGCCATCTTTCTCATTTCTGTGCAGCAAAAGCACCATGGGTCCATGCATTTCATTCCACTGGATTTCATCTGTCTTTGTCTTTGTTTACGTTGCTTGGTCCTGGCCGTCAACTTATCCTTGATGGTTTGAAAAGTCTTCTTAAAAGGGCACCAAACATGAACACCTTAGTTGCTCTTGGGGCTCTATCTTCATTTACAGTCAGTTCATTTGCTGCCTTTCTGCCAAAATTGGGTTGGAAGGCTTTCTTCGAAGAACCAATTATGCTAATTGCATTTGTCTTGTTAGGAAGGAATCTTGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACAGGACTTCTTAGTATGCTGCCATCAAAAGCTCGCCTGCTTGTTAACAATGGGGAAACAGAAGTTGACTCAATTGTTGAAGTTCCTTCTGGTACTCTTTCTGTTGGAGACCAGATTATTGTGTTACCTGGAGACTGTATTCCAGCAGATGGAGTTGTCCGAGCCGGTAGGAGCACTGTAGATGAATCAAGTTTCACCGGGGAGCCACTTCCAGTAACAAAACTACCTGGGAGTGAGGTCGCAGCTGGAAGTATAAATCTTAATGGAACTCTTACGATTGAAGTGCAGAGACCAGGTGGTGAGACTGCTATTGGGGACATTGTTCGTCTAGTTGAAGAGGCACAGAGTAGAGAAACTCCAGTACAGCGGTTGGCTGACAAGGTGGCTGGACACTTCACTTATGGAGTGATGGCAGTCTCTTTTACCACATTTACATTCTGGAGTCTGTTTGGCACAAACATTTTACATGCTTCTGTGTATCAAGGAAGTGCTATTTCATTGGCTTTGCAGCTTGCTTGCAGTGTTCTGGTTATTGCTTGTCCATGTGCGCTTGGGTTAGCCACACCTACTGCTGTGCTGGTTGGAACTTCTTTGGGAGCTACAAAAGGATTACTTTTGCGTGGTGGAAATATTCTAGAGAAGTTTGCCATGGTGAATGCTGTTGTGTTTGACAAAACAGGGACCCTGACGGTTGGTAGGCCTGTTGTAACAAAGATTGTCACTCCTACATGCAGACAAAATGCAAATTCAAGCCAAACTGAAGAAAATACTTGGTCTGATGTTGAAGTTCTGAGGTTAGCAGCTGCAGTAGAATCAAATTCAGTACATCCAGTTGGAAAAGCGATTGTTGATGCTGCTAAGGAATTTAACTGTCATAATACCAAGGTAGCAGATGGAACGTTCCTGGAAGAACCTGGATCTGGTGCAGTTGCAACCATTGATAACAAAAAGGTTTCTGTTGGGACATGGGAATGGATCACCAGGCATGGAATTAACAACAGTATCGAGCAAGAAGTGGAGGAGTGTAAAAACCAATCTGTTGTCTATATTGGAGTTGATGATACTCTAGCTGGCCTAATTTATTTTGAAGATGAAATAAGGGAAGATGCAAGACATGTTGTTGACACATTGTCTAAGCAAAATATTGATGTATACATGCTCTCTGGGGACAAAAGGAATGCTGCTGAGTATGTTGCATCTCTTGTTGGAATTCCTAAAGAGAAGCTACTTGATGCTTTGGAGCTTAGCAGGCTAACCATGAATACTGTAAAACAGAATCTTTGGTGGGCTTTTATTTACAACATTGTTGGGATTCCAATTGCAGCTGGAGTGTTATTTCCTGTAAATGGGACCATGCTGACTCCATCAATTGCAGGTGCTCTCATGGGGTTGAGTTCCATTGGCGTAATGTCTAACTCGTTACTTCTGAGATACAAATTTTCCTCAAATCAGAAACAAACACATGGTACAGTACCGAAGATCAAAATCCATGCTGATTCTGATTTGCCGCGCCAAAACCAGAAAATAAAATATTCAAGTTAG 2622 0.4439 MDSAITVTTTAQMALLKALHRHFTAPPHTILLRRNLNHALTSYNRCHRVSASFASAPPSRSLCFFGSLFRPTPFHLRCVSSSAASFASSAGGGNDGAGAGVGGGGSGGEFGDGNLKLVVDAVAQDLSVLSTDVIILDVSGMACGGCAANVKRILESQPQVSSASVNLTTETAIVWPVSEAKTEPNWQKQLGEALAEHLTGCGFNSSLRDSVGDNFLQIFQRKIEEKRKQLRESGRELAVSWALCAVCLVGHLSHFCAAKAPWVHAFHSTGFHLSLSLFTLLGPGRQLILDGLKSLLKRAPNMNTLVALGALSSFTVSSFAAFLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSMLPSKARLLVNNGETEVDSIVEVPSGTLSVGDQIIVLPGDCIPADGVVRAGRSTVDESSFTGEPLPVTKLPGSEVAAGSINLNGTLTIEVQRPGGETAIGDIVRLVEEAQSRETPVQRLADKVAGHFTYGVMAVSFTTFTFWSLFGTNILHASVYQGSAISLALQLACSVLVIACPCALGLATPTAVLVGTSLGATKGLLLRGGNILEKFAMVNAVVFDKTGTLTVGRPVVTKIVTPTCRQNANSSQTEENTWSDVEVLRLAAAVESNSVHPVGKAIVDAAKEFNCHNTKVADGTFLEEPGSGAVATIDNKKVSVGTWEWITRHGINNSIEQEVEECKNQSVVYIGVDDTLAGLIYFEDEIREDARHVVDTLSKQNIDVYMLSGDKRNAAEYVASLVGIPKEKLLDALELSRLTMNTVKQNLWWAFIYNIVGIPIAAGVLFPVNGTMLTPSIAGALMGLSSIGVMSNSLLLRYKFSSNQKQTHGTVPKIKIHADSDLPRQNQKIKYSS* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0865 873 Gene3D - 573 766 IPR023214 -
Lan11g0865 873 Gene3D - 133 211 - -
Lan11g0865 873 ProSitePatterns Heavy-metal-associated domain. 138 167 IPR017969 GO:0046872
Lan11g0865 873 PRINTS P-type cation-transporting ATPase superfamily signature 421 435 - -
Lan11g0865 873 PRINTS P-type cation-transporting ATPase superfamily signature 582 596 - -
Lan11g0865 873 PRINTS P-type cation-transporting ATPase superfamily signature 718 729 - -
Lan11g0865 873 PRINTS P-type cation-transporting ATPase superfamily signature 740 750 - -
Lan11g0865 873 SUPERFAMILY HMA, heavy metal-associated domain 133 180 IPR036163 GO:0046872
Lan11g0865 873 CDD HMA 136 203 IPR006121 GO:0046872
Lan11g0865 873 SUPERFAMILY HAD-like 570 766 IPR036412 -
Lan11g0865 873 Gene3D - 593 726 IPR023299 GO:0000166
Lan11g0865 873 SUPERFAMILY Calcium ATPase, transmembrane domain M 332 806 IPR023298 -
Lan11g0865 873 Coils Coil 216 236 - -
Lan11g0865 873 Pfam haloacid dehalogenase-like hydrolase 578 766 - -
Lan11g0865 873 PRINTS Copper-transporting ATPase signature 287 306 - -
Lan11g0865 873 PRINTS Copper-transporting ATPase signature 335 354 - -
Lan11g0865 873 PRINTS Copper-transporting ATPase signature 355 373 - -
Lan11g0865 873 PRINTS Copper-transporting ATPase signature 494 508 - -
Lan11g0865 873 PRINTS Copper-transporting ATPase signature 800 814 - -
Lan11g0865 873 ProSiteProfiles Heavy-metal-associated domain profile. 133 207 IPR006121 GO:0046872
Lan11g0865 873 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 339 606 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan11g0865 873 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 302 764 IPR027256 GO:0006812|GO:0016021|GO:0019829
Lan11g0865 873 ProSitePatterns E1-E2 ATPases phosphorylation site. 584 590 IPR018303 -
Lan11g0865 873 Pfam Heavy-metal-associated domain 136 203 IPR006121 GO:0046872
Lan11g0865 873 Pfam E1-E2 ATPase 366 561 - -
Lan11g0865 873 Gene3D - 352 475 - -
Lan11g0865 873 SUPERFAMILY Calcium ATPase, transduction domain A 384 471 IPR008250 -
Lan11g0865 873 PANTHER ATP7, ISOFORM B 77 766 - -
Lan11g0865 873 PANTHER ATP7, ISOFORM B 768 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0865 Lan-Chr11 8481185 8512887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0865 767 857 Primary Pumps ATPases AT1G63440 42.857 1.93e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0865 K17686 - gmx:100796210 1167.91