Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0853 ATGGAATTGGAAGCTGAAGCTGATCATCAAAATGGGATCCGAAGCAGACCCAATTTCCCACTTCAGCTATTAGAGAAAAAAGATAATGATGATTCATCAGAACACCCTTGTTCCACCACCGCAAACGACAACAGTGTCGGCGGCGGTGGAGACATCAACAACAGCCTCAGCTTTGGGGAGCAATCTAAGAAGCCGCCGCCAAAGCGAACCTCTACCAAGGACAGGCACACCAAGGTTGATGGCCGCGGCCGCCGGATCCGCATGCCGGCTGCCTGCGCCGCCAGGGTGTTCCAGCTGACGCGGGAACTTGGCCACAAATCCGACGGCGAGACTATTGAATGGCTCCTACAGCAGGCGGAGCCTGCTGTGATCGCCGCCACTGGTACTGGCACCATCCCGGCCAACTTTACTTCCCTCAACATCTCCCTCAGAAGCTCCGGCTCCACCATGTCGGCGCCGTCGCACTACTTCCGGGGAAACTACTTCAATCCTAGCACGTTCTCATCCAACGCTGCTGCGGCTCAGTTAAGGAACCGTGGAGAATGGGAATGGAACATGAACAACAACAACAACAAGAACATGCTCATGGAAGATTCTCGTAGGTCTACCATGTTGTTCCCCGGTTCCTCGGAGAATTCTAATAACAATATCACATCGCTTTTGAATTTCAACCCTAATGTGAATGCCATGCTACAAACCAAACAAGAAGAACCTGGAAGCGGTGGTGGTAGTCTTGAATTAATGGCCAGTGATTCTGATGCAAGTTTAGGAAGAAAAAGAAGGCAAGAACAACCAGAAGTGTCAAATATGGGAAGCTATTTACTACAATCTAGTACTTCGGGGTCGATTCCGGCGAGTCACGCTTCCAATTCGGCGACTTTTTGGATGGTGGCGGGTAACGGTAACCAAGGCATGAGCGGTGGTAACAATGGTGGTGATCCAATTTGGGCAATTCCCTCTGTTGCTGGGAATAGTGGAATGTATAGAGGTGCCATGTCAAGTGGTGGGATTCATTTCATGAATTTTGCTTCTCCAATGCCACTTATGCCCGGTGGTGGACAACTAGGTCCAGGAATGGGTGGTGGCAGCGGCGGCGGTGCTGCAATGGTAAATGAAAGTAACTTAGGTATGCTTGCAGCACTTAATGCTTATAGGCAGATGCAGGCCAACGGCGGCGTACCGGAGTCTCCGGCAAGCACCAGGCATCATCACGGAGGAGATGATGGGCATGACACAAGCAGTCAACATTCCTAA 1254 0.5112 MELEAEADHQNGIRSRPNFPLQLLEKKDNDDSSEHPCSTTANDNSVGGGGDINNSLSFGEQSKKPPPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRGNYFNPSTFSSNAAAAQLRNRGEWEWNMNNNNNKNMLMEDSRRSTMLFPGSSENSNNNITSLLNFNPNVNAMLQTKQEEPGSGGGSLELMASDSDASLGRKRRQEQPEVSNMGSYLLQSSTSGSIPASHASNSATFWMVAGNGNQGMSGGNNGGDPIWAIPSVAGNSGMYRGAMSSGGIHFMNFASPMPLMPGGGQLGPGMGGGSGGGAAMVNESNLGMLAALNAYRQMQANGGVPESPASTRHHHGGDDGHDTSSQHS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0853 417 MobiDBLite consensus disorder prediction 1 83 - -
Lan11g0853 417 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 9 417 IPR005333 GO:0003700
Lan11g0853 417 MobiDBLite consensus disorder prediction 35 65 - -
Lan11g0853 417 MobiDBLite consensus disorder prediction 390 417 - -
Lan11g0853 417 MobiDBLite consensus disorder prediction 66 83 - -
Lan11g0853 417 Pfam TCP family transcription factor 70 196 IPR017887 -
Lan11g0853 417 MobiDBLite consensus disorder prediction 400 417 - -
Lan11g0853 417 ProSiteProfiles TCP domain profile. 72 126 IPR017887 -
Lan11g0853 417 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 9 417 - -
Lan11g0853 417 MobiDBLite consensus disorder prediction 233 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0853 Lan-Chr11 8342990 8345935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0853 17 355 TCP Transcription Factor Family AT3G47620 39.130 2.45e-55 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan11g0853 TCP 8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0853 - - gmx:100809966 484.952