Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0845 ATGGCATCTGAACCAGAGGTTTCTGAACTCACCTCTCTGTTTGAAACGTTATTTAGAAACAGAGACATGTCTCTGTTCCTACCCTTCATCTTTGGTTCCCCAGAATCATCACCACCAAGTGGAAATAACGAAGACCCATATCAGGAAAATGATGATAATGAAGATTCCCACCGTCAAAGAATCATCTTGGTGAACCCTTTTACACAGGGCATGGTGGTGGTTGATGGTGCTTCAAGCCTTGAGAATCTGTTTCGTGAACTTGGGAGTAGCAAAAGTGGTCACCCACCAGCTTCAAAGGAATCAATTGAGGCCATTCCAAGTGTGGAAATTGTAGGAAGTGATGATCTTGATGAGTGTGTGGTTTGTTTGGAAGAGTTTGAGGTTGGTGGGGTGGCAAAAGTTATGCCTTGTAAGCATAAATTTCACCCTAATTGCATTGAAAAGTGGCTTGGGATTCATGGAAATTGTCCTGTTTGTAGGTATCAGATGCCTGTTGAGGAGAAAGATGGGGGCATGAAAAGGGATGAGGAAGAAGGACGAGGAGAGAGGAGAAGGGTTGGTGGTGGTGAAGTTTGGGTTAGTTTTTCTATTAATAGAGGACGTAGGAGAAGCCATGATTCAAATCAAGCTCCTTCTGGTGATTCCAGTGATAATTCATATAGTCCTAGTGATGCTGCTGAGGTAGAGAATTAG 693 0.4329 MASEPEVSELTSLFETLFRNRDMSLFLPFIFGSPESSPPSGNNEDPYQENDDNEDSHRQRIILVNPFTQGMVVVDGASSLENLFRELGSSKSGHPPASKESIEAIPSVEIVGSDDLDECVVCLEEFEVGGVAKVMPCKHKFHPNCIEKWLGIHGNCPVCRYQMPVEEKDGGMKRDEEEGRGERRRVGGGEVWVSFSINRGRRRSHDSNQAPSGDSSDNSYSPSDAAEVEN* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0845 230 ProSiteProfiles Zinc finger RING-type profile. 119 160 IPR001841 -
Lan11g0845 230 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 11 171 - -
Lan11g0845 230 MobiDBLite consensus disorder prediction 196 230 - -
Lan11g0845 230 MobiDBLite consensus disorder prediction 34 55 - -
Lan11g0845 230 MobiDBLite consensus disorder prediction 209 230 - -
Lan11g0845 230 SMART ring_2 119 159 IPR001841 -
Lan11g0845 230 CDD RING-H2_PA-TM-RING 118 160 - -
Lan11g0845 230 PANTHER - 11 171 - -
Lan11g0845 230 Pfam Ring finger domain 117 160 IPR001841 -
Lan11g0845 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 166 IPR013083 -
Lan11g0845 230 SUPERFAMILY RING/U-box 109 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0845 Lan-Chr11 8214900 8215874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0845 1 202 C3H Transcription Factor Family AT1G26800 48.544 7.12e-60 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0845 - - lang:109356689 312.383