Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0844 ATGGATCAACAAAATATGCAAAATCAAAGTGTACATTCTGTTCTGTCCACTGATGCAAAACCAAGGCTAAAGTGGACTCCTGAACTTCACCAAAGATTCATTGAGGCAACTAATCAACTTGGAGGAGCAGAAAAGGCAACTCCAAAGAGTCTTATGAGGGTGATGGGGATTCCAGGACTTACTTTGTACCACCTGAAGAGTCATTTACAGAAATATAGACTTGGGAAAAGCCAACAGGTAGAAACCTGTTCTGACAACAATCAACAAGATTACAAAGAATTCAAGTGCAGTGATGATGATCATTGCAGCAAGGAAATCAGTGTTGGGGTCCAGAATCATATTCCTGAAAATTTGCAGATAACTCAGGCTCTCCAAATGCAAATGGAAGTTCAAAGGAAACTTTATGAACAAATTGAGGTGCAAAAAAATTTGCAACTTAAAATTGAAGCTCAAGGACAGTATTTACAATCAGTACTAAAGAAAGCACAAGAAGCACTAGGTGGATACAATTCTTCCACAGTAGGAATAGAACTCACAAGAGCAGAACTTTCTCACCTAGAGACAATAATCAACAATGCTTCACCAAGTTCTCCAATTTCAGAACTAACAGAAGCCAAAGGATTAAGTTTGCACTGTGGTAAGAGGAAAAAAGATAGAGGTACTATGTGTTCACTTGAAAGTTCTTTGACATCTTCTGAAAGCTGTGGAAGAAAGAAAGAGAAAAATCCTAAGGAATTACCATTAGTGGATATTAAGCATGAAGATAAAGGATCAAATGGTGGTTCAAGTAATGATGAAGCTAGTGGAAGAAAGATAAGTGGTGCAAGTGATTCTGATGGTAGCTGTGTTGAACAACCTTGTGGTAAAACATGTGGCAACAAGTTGAAGAAACCCAAGTTGTTGGAATTGATTGATTTGAACAACCAATATGAGAGTGACATGGACTCAGGTTCAAAAACAACATTAGACTTAAATTGCAGTTCAAGCTTTTAG 993 0.3756 MDQQNMQNQSVHSVLSTDAKPRLKWTPELHQRFIEATNQLGGAEKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQQVETCSDNNQQDYKEFKCSDDDHCSKEISVGVQNHIPENLQITQALQMQMEVQRKLYEQIEVQKNLQLKIEAQGQYLQSVLKKAQEALGGYNSSTVGIELTRAELSHLETIINNASPSSPISELTEAKGLSLHCGKRKKDRGTMCSLESSLTSSESCGRKKEKNPKELPLVDIKHEDKGSNGGSSNDEASGRKISGASDSDGSCVEQPCGKTCGNKLKKPKLLELIDLNNQYESDMDSGSKTTLDLNCSSSF* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0844 330 Pfam Myb-like DNA-binding domain 22 73 IPR001005 -
Lan11g0844 330 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 330 IPR044848 GO:0003700
Lan11g0844 330 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 330 - -
Lan11g0844 330 Gene3D - 19 77 - -
Lan11g0844 330 MobiDBLite consensus disorder prediction 233 260 - -
Lan11g0844 330 MobiDBLite consensus disorder prediction 232 294 - -
Lan11g0844 330 MobiDBLite consensus disorder prediction 309 330 - -
Lan11g0844 330 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Lan11g0844 330 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Lan11g0844 330 Pfam MYB-CC type transfactor, LHEQLE motif 118 164 IPR025756 -
Lan11g0844 330 MobiDBLite consensus disorder prediction 261 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0844 Lan-Chr11 8209012 8211035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0844 14 325 G2-like Transcription Factor Family AT1G69580 47.147 9.25e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan11g0844 Myb_DNA-binding 1.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0844 - - gmx:100787178 474.937