Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0783 ATGCTCATCTCGAGGCAAACCTTCTACACCTTTTCTTCTTCTCCTTCTTCATTTCTTTGTATCATTTTCCTACACACAACTCTTCTCTATGGCCTTGCTTTTTCTTCAAACCATGAAGCCTCTATTCTCTTCACATGGCTTCATAGTTCTGCATCACCACCCCCTCCTTCTTTCTCTAACTGGAACATCCATGACACAAGTCCATGCAAATGGTCCTGCATAACATGCTCCTCACTAGGCTTTGTCACTGAGATCAACATAGAATCAATCCCTCTTCAGCTTCCAATACCTTCTAATATCTCTTCATTCCCATTTCTTAAAAAGCTTGTTATTTCTGATGCCAACCTCACTGGAACAATCCCTTTTGATATTGGTGATTGTTCTTCACTCACTGCTTTAGACCTTAGCTCAAACAACCTTGTTGGGTCTATACCTTCAAGTATTGGAAAGCTCAACAACCTTGTTAACTTGTCTTTGAACTCAAACCAACTCACAGGAAAAATACCAGTTGAGATAAGCAACTGCATTGGCCTAAAAAATCTTCTCCTTTTTGATAATCAGCTAGGTGGAAGTATTCCACTTGAGTTAGGAAAGTTGTTGCAACTCGAAGTCCTTAGAGCTGGTGGAAACAAAGATATAGATGGGAAGATTCCTGAAGAGCTTGGAGAATGTAGAAATTTGACTGTGTTGGGTCTGGCTGATACTAGAATTTCTGGTTCTTTGCCTGCTTCATTGGGTAAACTTAACAAGCTTCAGACTTTGTCTATCTACACTACTATGCTATCTGGTGAAATTCCACCAGATTTAGGTAACTGTTCTGAACTTGTTGACTTGTTTCTCTATGAGAATAGTTTATCAGGATCTCTTCCATCTGAGCTTGGTAAGCTACAAAAGCTGGAACAACTGTTTTTATGGAAGAATAGTATTGTTGGGGCTATACCTGAAGAGATTGGTAACTGTACAAGCTTGAGAAAATTTGATCTCTCTTTGAATTCTCTATCTGGAACTATACCTTTGTCTTTGGGGGGTCTTTTAGAACTTGAGGAGTTTATGATTAGTGATAATAATGTGTCTGGTTCAATACCTTCAAGTTTTTCAAATGCTAAGAATCTTCAACAGTTGCAAGTTGACACAAATCAGATCTCAGGCTTGATTCCACCAGAGCTTGGGAAGTTGTCAAATCTCTTAGTGTTCTTTGCTTGGCAGAACCAGCTTGAAGGAAGTATTCCTTCTACATTGGGAAACTGTAGTAAGCTACAAGCACTAGACTTGTCTCACAATGCACTCACTGGTAGCATTCCTGCTAGTCTTTTTCTGCTCCAAAACCTCACAAAAATGCTTCTGATTTCCAATGACATATCAGGTTCTATACCATCAGAAATAGGCAGTTGTTCCTCTCTTATAAGGTTGAGGCTTGGAAACAATAGGATTACTGGCAGCATTCCTAAGACAGTCTGCAACCTCAAGAGCTTGAACTTCTTAGATCTCTCAGGTAACCGCCTCTCCGGGTCGGTGCCTGATGAGATTGGAAGCTGCACAGAACTTCAAATGATAGACTTCAGTAGTAACAACTTAGAAGGACCACTACCTAATTCTTTGTCATCACTATCCTCACTTCAGGTACTGGATGCATCTTCAAACAAGTTCTCTGGTCCCATAGCATCAAGTTTCGGACATCTTGTTTTTCTAAGTAAGTTAATCCTAGGCAATAATTTGTTTTCTGGATCAATACCAGCATCACTAGGCCTATGTTCAAATCTCCAACTTCTTGATCTTAGTAGCAATCAGTTCACTGGAAACATACCAGCTGAGCTAGGCCTTATTGAGAGTCTAGAAATTGCTCTTAATCTTAGTAGCAATTCACTCAGTGGCCCAATCCCACCTCAGATATCTGCTCTTAACAAGCTTTCAATACTTGACCTGTCACATAACCAATTGGAGGGAGATTTGCAATCTCTTGGACTGCTATACAATCTTGTTTCCCTTAATGTTTCATACAATAAGTTCACTGGATTTCTTCCAGATAACAAGCTTTTCAGGCAGTTATCATCAGAAGACCTCACCGGCAATCAAGGCCTTTGCAATTCAGGTCAGGACTCATGCTTTGTTAATGGTTCTGGCAAGACGAGTTTGTTATCGAATGGAAATGATGCAAGGAAGTCGCGGAGGCTTAAACTAGCAATTGGATTGCTGATAACCTTAACAGTAATAATGATAATTATGGGGATAACAGCTGTGATAAAAGCAAGAAGAGGCATTAGAGATGAGGATTCAGAATTAGGAGGAGACTCATGGGCATGGCAATTCATACCTTTCCAGAAGCTAAATTTTTCGGTGGAACAAATACTGAGATGCTTGGTTGATAGAAATGTGATTGGGAAGGGATGCTCGGGTGTTGTTTATCGCGCTGAATTGGATAATGGTGAAGTCATTGCTGTGAAGAAACTATGGCCAATAACAAATGATGCAGGGGAGGCATCTAGGGATGAAAAAAGTGGAGTTCGCGACTCATTCTCAACTGAGGTGAAGACACTAGGTTCAATCCGTCATAAGAACATTGTCAGATTCTTAGGCTGTTGTTGGAACAAGAAAAACAGATTGCTCATATTTGATTATATGGCTAATGGAAGTTTAAGCAGTATACTCCATGAGAGGACTGGAAATTCTCTAGAATGGGAACTTAGGTACCGAATCTTGTTAGGCGCCGCAGAAGGCCTCGCATATCTGCATCATGATTGTGTCCCGCCTATAGTCCACAGAGATATTAAAGCCAATAACATCCTCATTGGCCTTGAATTTGAGCCTTATATTGCTGACTTTGGCTTGGCTAAGCTTGTTGACAATGGGGATTTCGGTCGATCTTCTAATACAGTAGCTGGTTCCTATGGGTATATTGCCCCAGAATATGGGTATATGATGAAGATCACAGAGAAGAGTGATGTTTATAGCTATGGAATAGTTCTGTTAGAAGTCTTGACAGGTAAGCAACCAATTGATCCAACAATACCAGATGGTCTACATGTTGTTGATTGGGTGAGAAAGAAAAGAGGGCTTGAAGTACTTGATCCTAGCTTACTCTCTAGACCAGAATCAGAAATAGAAGAAATGATGCAAGCATTGGGAATAGCCTTATTATGTGTAAATTCATCACCAGATGAAAGACCAACAATGAGAGATATTGCTGCAATGCTTAAGGAAATAAGGCATGAGAGAGAGGAATATGCAAAATTTGATGCACTTCTAAAAGGGTCTCCTGCAAATGAAAATAAAAGCACTTCTGGGATTCTTGCAACAACATCAGTGCCAGTCATGCAAAACTTGAATGCTAAAAGTAACAACACAAGCTTCTCTGTGTCTTCACTACTTCATTCATCATCTTTTCAGTGA 3387 0.4006 MLISRQTFYTFSSSPSSFLCIIFLHTTLLYGLAFSSNHEASILFTWLHSSASPPPPSFSNWNIHDTSPCKWSCITCSSLGFVTEINIESIPLQLPIPSNISSFPFLKKLVISDANLTGTIPFDIGDCSSLTALDLSSNNLVGSIPSSIGKLNNLVNLSLNSNQLTGKIPVEISNCIGLKNLLLFDNQLGGSIPLELGKLLQLEVLRAGGNKDIDGKIPEELGECRNLTVLGLADTRISGSLPASLGKLNKLQTLSIYTTMLSGEIPPDLGNCSELVDLFLYENSLSGSLPSELGKLQKLEQLFLWKNSIVGAIPEEIGNCTSLRKFDLSLNSLSGTIPLSLGGLLELEEFMISDNNVSGSIPSSFSNAKNLQQLQVDTNQISGLIPPELGKLSNLLVFFAWQNQLEGSIPSTLGNCSKLQALDLSHNALTGSIPASLFLLQNLTKMLLISNDISGSIPSEIGSCSSLIRLRLGNNRITGSIPKTVCNLKSLNFLDLSGNRLSGSVPDEIGSCTELQMIDFSSNNLEGPLPNSLSSLSSLQVLDASSNKFSGPIASSFGHLVFLSKLILGNNLFSGSIPASLGLCSNLQLLDLSSNQFTGNIPAELGLIESLEIALNLSSNSLSGPIPPQISALNKLSILDLSHNQLEGDLQSLGLLYNLVSLNVSYNKFTGFLPDNKLFRQLSSEDLTGNQGLCNSGQDSCFVNGSGKTSLLSNGNDARKSRRLKLAIGLLITLTVIMIIMGITAVIKARRGIRDEDSELGGDSWAWQFIPFQKLNFSVEQILRCLVDRNVIGKGCSGVVYRAELDNGEVIAVKKLWPITNDAGEASRDEKSGVRDSFSTEVKTLGSIRHKNIVRFLGCCWNKKNRLLIFDYMANGSLSSILHERTGNSLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDNGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGIVLLEVLTGKQPIDPTIPDGLHVVDWVRKKRGLEVLDPSLLSRPESEIEEMMQALGIALLCVNSSPDERPTMRDIAAMLKEIRHEREEYAKFDALLKGSPANENKSTSGILATTSVPVMQNLNAKSNNTSFSVSSLLHSSSFQ* 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0783 1128 Gene3D Ribonuclease Inhibitor 241 335 IPR032675 -
Lan11g0783 1128 ProSitePatterns Protein kinases ATP-binding region signature. 792 815 IPR017441 GO:0005524
Lan11g0783 1128 Gene3D Transferase(Phosphotransferase) domain 1 873 1083 - -
Lan11g0783 1128 PRINTS Leucine-rich repeat signature 419 432 - -
Lan11g0783 1128 PRINTS Leucine-rich repeat signature 633 646 - -
Lan11g0783 1128 Pfam Protein tyrosine and serine/threonine kinase 790 1063 IPR001245 GO:0004672|GO:0006468
Lan11g0783 1128 SUPERFAMILY RNI-like 109 483 - -
Lan11g0783 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 917 929 IPR008271 GO:0004672|GO:0006468
Lan11g0783 1128 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 18 1124 - -
Lan11g0783 1128 Gene3D Ribonuclease Inhibitor 336 431 IPR032675 -
Lan11g0783 1128 Gene3D Ribonuclease Inhibitor 529 613 IPR032675 -
Lan11g0783 1128 Gene3D Ribonuclease Inhibitor 432 528 IPR032675 -
Lan11g0783 1128 Gene3D Ribonuclease Inhibitor 614 693 IPR032675 -
Lan11g0783 1128 Gene3D Ribonuclease Inhibitor 154 240 IPR032675 -
Lan11g0783 1128 Gene3D Phosphorylase Kinase; domain 1 772 872 - -
Lan11g0783 1128 ProSiteProfiles Leucine-rich repeat profile. 635 657 IPR001611 GO:0005515
Lan11g0783 1128 ProSiteProfiles Leucine-rich repeat profile. 418 440 IPR001611 GO:0005515
Lan11g0783 1128 SMART LRR_typ_2 560 584 IPR003591 -
Lan11g0783 1128 SMART LRR_typ_2 416 440 IPR003591 -
Lan11g0783 1128 SMART LRR_typ_2 296 320 IPR003591 -
Lan11g0783 1128 SMART LRR_typ_2 536 559 IPR003591 -
Lan11g0783 1128 SMART LRR_typ_2 151 175 IPR003591 -
Lan11g0783 1128 SMART LRR_typ_2 488 512 IPR003591 -
Lan11g0783 1128 SMART LRR_typ_2 656 681 IPR003591 -
Lan11g0783 1128 SUPERFAMILY L domain-like 385 702 - -
Lan11g0783 1128 ProSiteProfiles Protein kinase domain profile. 786 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0783 1128 Gene3D Ribonuclease Inhibitor 39 153 IPR032675 -
Lan11g0783 1128 SUPERFAMILY Protein kinase-like (PK-like) 774 1064 IPR011009 -
Lan11g0783 1128 SMART serkin_6 786 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0783 1128 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Lan11g0783 1128 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 18 1124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0783 Lan-Chr11 7312233 7316577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0783 34 1083 Receptor kinase-like Gene Family AT5G56040 47.230 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan11g0783 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0783 - - mtr:MTR_5g045910 1750.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0783 11 7312233 7316577 Lan2g0714 2 14813678 14824267 LSH